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从头算量子化学研究洞察甘氨酸钠的水合结构

An insight into hydration structure of sodium glycinate from ab initio quantum chemical study.

作者信息

Chen Dong, Wei Zhichao, Liu Bo

机构信息

Institute of Photo-Biophysics, Physics and Electronics Department, Henan University, 475004, Kaifeng, China,

出版信息

J Mol Model. 2015 Sep;21(9):234. doi: 10.1007/s00894-015-2781-3. Epub 2015 Aug 14.

Abstract

The hydration structure of sodium glycinate (Na(+)GL(-)) is probed by the Monte-Carlo multiple minimum (MCMM) method combined with quantum mechanical (QM) calculations at the MP2/6-311++G(d,p) level. In the gas phase, the energy of [Na(+)GL(-)]β is more than 30 kJ mol(-1) higher than [Na(+)GL(-)]α. With higher degrees of hydration, our results indicate that the most stable conformers of [Na(+)GL(-)]∙(H2O)8 were derived from [Na(+)GL(-)]β instead of [Na(+)GL(-)]α. The stable conformers determined by the conductor-like polarizable continuum model (CPCM) also show that [Na(+)GL(-)]β is more stable than [Na(+)GL(-)]α in the liquid phase. By analyzing the hydration process, water…water hydrogen bonding interaction will be more preferable than ion…water interaction as the number of water molecules increases. According to the electronic density at the bond critical point on the Na-X bonds (X = O1, O2, N) in the low-energy conformers, Na(+)GL(-) will be dissociated as Na(+) and GL(-) in the bulk water, which is not predicted by the CPCM model. The structure features and the charge redistribution of Na(+)GL(-) will provide a physical explanation for the weakening Na-O1 interaction.

摘要

采用蒙特卡罗多极小值(MCMM)方法并结合MP2/6 - 311++G(d,p)水平的量子力学(QM)计算,对甘氨酸钠(Na(+)GL(-))的水合结构进行了探究。在气相中,[Na(+)GL(-)]β的能量比[Na(+)GL(-)]α高30 kJ mol(-1)以上。随着水合程度的提高,我们的结果表明,[Na(+)GL(-)]∙(H2O)8最稳定的构象异构体源自[Na(+)GL(-)]β而非[Na(+)GL(-)]α。由导体类极化连续介质模型(CPCM)确定的稳定构象异构体也表明,在液相中[Na(+)GL(-)]β比[Na(+)GL(-)]α更稳定。通过分析水合过程,随着水分子数量的增加,水……水氢键相互作用将比离子……水相互作用更占优势。根据低能量构象异构体中Na - X键(X = O1、O2、N)上键临界点处的电子密度,Na(+)GL(-)在大量水中会解离为Na(+)和GL(-),这是CPCM模型所未预测到的。Na(+)GL(-)的结构特征和电荷重新分布将为Na - O1相互作用的减弱提供物理解释。

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