赫克霍恩分枝杆菌菌株RLE的基因组序列草图
Draft Genome Sequence of Mycobacterium heckeshornense Strain RLE.
作者信息
Greninger Alexander L, Cunningham Gail, Chiu Charles Y, Miller Steve
机构信息
Department of Laboratory Medicine, UCSF, San Francisco, California, USA.
Department of Laboratory Medicine, UCSF, San Francisco, California, USA
出版信息
Genome Announc. 2015 Aug 27;3(4):e00930-15. doi: 10.1128/genomeA.00930-15.
Abstract
We report here the draft genome sequence of Mycobacterium heckeshornense strain RLE isolated from a sputum sample from a patient with shortness of breath. This is the first draft genome sequence of M. heckeshornense.
摘要
我们在此报告从一名呼吸急促患者的痰液样本中分离出的赫克霍恩分枝杆菌菌株RLE的基因组序列草图。这是赫克霍恩分枝杆菌的首个基因组序列草图。
相似文献
1
Draft Genome Sequence of Mycobacterium heckeshornense Strain RLE.赫克霍恩分枝杆菌菌株RLE的基因组序列草图
Genome Announc. 2015 Aug 27;3(4):e00930-15. doi: 10.1128/genomeA.00930-15.
2
Draft Genome Sequence of a Mycobacterium heckeshornense Clinical Isolate.海克霍恩分枝杆菌临床分离株的基因组序列草图
Genome Announc. 2018 Mar 29;6(13):e00178-18. doi: 10.1128/genomeA.00178-18.
3
Complete Genome Sequence of Mycobacterium heckeshornense JCM 15655, Closely Related to a Pathogenic Nontuberculous Mycobacterial Species, Mycobacterium xenopi.赫克肖尔内分枝杆菌JCM 15655的全基因组序列，该菌与致病性非结核分枝杆菌物种蟾蜍分枝杆菌密切相关。
Microbiol Resour Announc. 2021 Mar 11;10(10):e00020-21. doi: 10.1128/MRA.00020-21.
4
Draft Genome Sequence of Mycobacterium obuense Strain UC1, Isolated from Patient Sputum.从患者痰液中分离出的欧布分枝杆菌菌株UC1的基因组序列草图
Genome Announc. 2015 Jun 11;3(3):e00612-15. doi: 10.1128/genomeA.00612-15.
5
Complete Genome Sequencing of Mycobacterium heckeshornense Strain JMUB5695, Isolated from Necrotizing Granulomatous Lesions.从坏死性肉芽肿病变中分离出的赫克霍恩分枝杆菌菌株JMUB5695的全基因组测序
Microbiol Resour Announc. 2021 Jul 8;10(27):e0014121. doi: 10.1128/MRA.00141-21.
6
Pulmonary Mycobacterium heckeshornense infection in a healthy woman.一名健康女性的肺部赫克霍恩分枝杆菌感染
J Infect Chemother. 2018 Jun;24(6):483-486. doi: 10.1016/j.jiac.2018.01.006. Epub 2018 Mar 1.
7
[Microbiologically identified isolates of Mycobacterium heckeshornense in two patients].[两名患者中经微生物学鉴定的赫克霍恩分枝杆菌分离株]
Kekkaku. 2006 Oct;81(10):603-7.
8
Draft Genome Sequence of Mycobacterium elephantis Strain Lipa.象分枝杆菌利帕菌株的基因组序列草图
Genome Announc. 2015 Jun 25;3(3):e00691-15. doi: 10.1128/genomeA.00691-15.
9
Mycobacterium heckeshornense sp. nov., A new pathogenic slowly growing Mycobacterium sp. Causing cavitary lung disease in an immunocompetent patient.赫克霍恩分枝杆菌新种，一种新的致病性缓慢生长分枝杆菌，在免疫功能正常患者中引起空洞性肺病。
J Clin Microbiol. 2000 Nov;38(11):4102-7. doi: 10.1128/JCM.38.11.4102-4107.2000.
10
Draft Genome Sequence of Mycobacterium arupense Strain GUC1.阿鲁彭斯分枝杆菌菌株GUC1的基因组序列草图
Genome Announc. 2015 Jun 11;3(3):e00630-15. doi: 10.1128/genomeA.00630-15.
引用本文的文献
1
Complete Genome Sequence of Mycobacterium heckeshornense JCM 15655, Closely Related to a Pathogenic Nontuberculous Mycobacterial Species, Mycobacterium xenopi.赫克肖尔内分枝杆菌JCM 15655的全基因组序列，该菌与致病性非结核分枝杆菌物种蟾蜍分枝杆菌密切相关。
Microbiol Resour Announc. 2021 Mar 11;10(10):e00020-21. doi: 10.1128/MRA.00020-21.
本文引用的文献
1
Pott's disease? AIDS-associated Mycobacterium heckeshornense spinal osteomyelitis and diskitis.波特病？艾滋病相关的赫克霍恩分枝杆菌性脊髓骨髓炎和椎间盘炎。
J Clin Microbiol. 2015 Feb;53(2):716-8. doi: 10.1128/JCM.02686-14. Epub 2014 Nov 26.
2
A cloud-compatible bioinformatics pipeline for ultrarapid pathogen identification from next-generation sequencing of clinical samples.一种与云兼容的生物信息学流程，用于从临床样本的下一代测序中进行超快速病原体鉴定。
Genome Res. 2014 Jul;24(7):1180-92. doi: 10.1101/gr.171934.113. Epub 2014 Jun 4.
3
Prokka: rapid prokaryotic genome annotation.Prokka：快速的原核生物基因组注释。
Bioinformatics. 2014 Jul 15;30(14):2068-9. doi: 10.1093/bioinformatics/btu153. Epub 2014 Mar 18.
4
First description of Mycobacterium heckeshornense infection in a feline immunodeficiency virus-positive cat.猫免疫缺陷病毒阳性猫中赫克霍恩分枝杆菌感染的首次描述。
J Feline Med Surg. 2013 Dec;15(12):1141-4. doi: 10.1177/1098612X13490711.
5
The comprehensive antibiotic resistance database.全面抗生素耐药性数据库。
Antimicrob Agents Chemother. 2013 Jul;57(7):3348-57. doi: 10.1128/AAC.00419-13. Epub 2013 May 6.
6
SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.SPAdes：一种新的基因组组装算法及其在单细胞测序中的应用
J Comput Biol. 2012 May;19(5):455-77. doi: 10.1089/cmb.2012.0021. Epub 2012 Apr 16.
7
Mycobacterium heckeshornense lung infection that was diagnosed as Mycobacterium xenopi disease by DNA-DNA hybridization (DDH).通过DNA-DNA杂交（DDH）诊断为偶发分枝杆菌病的赫克霍恩分枝杆菌肺部感染。
Intern Med. 2011;50(11):1251-3. doi: 10.2169/internalmedicine.50.4628. Epub 2011 Jun 1.
8
Mycobacterium heckeshornense peritonitis in a peritoneal dialysis patient: a case report and review of the literature.海克霍恩分枝杆菌性腹膜炎在腹膜透析患者中的感染：病例报告及文献复习。
Clin Microbiol Infect. 2011 Aug;17(8):1262-4. doi: 10.1111/j.1469-0691.2010.03449.x. Epub 2011 Mar 7.
9
Mycobacterium heckeshornense infection in HIV-infected patient.一名HIV感染患者感染赫克霍恩分枝杆菌
Emerg Infect Dis. 2010 Nov;16(11):1801-3. doi: 10.3201/eid1611.091226.
10
Isolation of mycobacteria other than Mycobacterium avium from porcine lymph nodes.从猪的淋巴结中分离除了鸟分枝杆菌以外的分枝杆菌。
Vet Microbiol. 2010 Jul 29;144(1-2):250-3. doi: 10.1016/j.vetmic.2009.12.047. Epub 2010 Jan 11.
Zotero 插件