Henze Miriam J, Oakley Todd H
*Department of Biology, Lund University, Lund, Sweden;
Department of Ecology, Evolution and Marine Biology, University of California, Santa Barbara, CA, USA
Integr Comp Biol. 2015 Nov;55(5):830-42. doi: 10.1093/icb/icv100. Epub 2015 Aug 28.
Pancrustacea (Hexapoda plus Crustacea) display an enormous diversity of eye designs, including multiple types of compound eyes and single-chambered eyes, often with color vision and/or polarization vision. Although the eyes of some pancrustaceans are well-studied, there is still much to learn about the evolutionary paths to this amazing visual diversity. Here, we examine the evolutionary history of eyes and opsins across the principle groups of Pancrustacea. First, we review the distribution of lateral and median eyes, which are found in all major pancrustacean clades (Oligostraca, Multicrustacea, and Allotriocarida). At the same time, each of those three clades has taxa that lack lateral and/or median eyes. We then compile data on the expression of visual r-opsins (rhabdomeric opsins) in lateral and median eyes across Pancrustacea and find no evidence for ancient opsin clades expressed in only one type of eye. Instead, opsin clades with eye-specific expression are products of recent gene duplications, indicating a dynamic past, during which opsins often changed expression from one type of eye to another. We also investigate the evolutionary history of peropsins and r-opsins, which are both known to be expressed in eyes of arthropods. By searching published transcriptomes, we discover for the first time crustacean peropsins and suggest that previously reported odonate opsins may also be peropsins. Finally, from analyzing a reconciled, phylogenetic tree of arthropod r-opsins, we infer that the ancestral pancrustacean had four visual opsin genes, which we call LW2, MW1, MW2, and SW. These are the progenitors of opsin clades that later were variously duplicated or lost during pancrustacean evolution. Together, our results reveal a particularly dynamic history, with losses of eyes, duplication and loss of opsin genes, and changes in opsin expression between types of eyes.
泛甲壳动物(六足动物加甲壳动物)展现出极其多样的眼睛结构,包括多种类型的复眼和单腔眼,通常具有色觉和/或偏振视觉。尽管一些泛甲壳动物的眼睛已得到充分研究,但对于这种惊人的视觉多样性的进化路径仍有许多有待了解之处。在此,我们研究了泛甲壳动物主要类群眼睛和视蛋白的进化历史。首先,我们回顾了侧眼和中眼的分布情况,它们存在于所有主要的泛甲壳动物分支(寡甲类、多甲类和异甲类)中。同时,这三个分支中的每一个都有一些类群缺乏侧眼和/或中眼。然后,我们汇总了泛甲壳动物侧眼和中眼中视觉r-视蛋白(视杆视蛋白)表达的数据,未发现仅在一种眼睛类型中表达的古老视蛋白分支的证据。相反,具有眼睛特异性表达的视蛋白分支是近期基因复制的产物,这表明过去情况动态多变,在此期间视蛋白的表达常常从一种眼睛类型转变为另一种眼睛类型。我们还研究了视周蛋白和r-视蛋白的进化历史,已知它们都在节肢动物的眼睛中表达。通过搜索已发表的转录组,我们首次发现了甲壳动物视周蛋白,并表明先前报道的蜻蜓目视蛋白可能也是视周蛋白。最后,通过分析节肢动物r-视蛋白的协调系统发育树,我们推断泛甲壳动物的祖先有四个视觉视蛋白基因,我们将其称为LW2、MW1、MW2和SW。这些是视蛋白分支的祖基因,后来在泛甲壳动物进化过程中经历了不同程度的复制或丢失。总之,我们的研究结果揭示了一段特别动态的历史,包括眼睛的丢失、视蛋白基因的复制和丢失,以及不同眼睛类型之间视蛋白表达的变化。