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纳米定量构效关系:作为不同条件数学函数的富勒烯致突变性模型。

Nano-QSAR: Model of mutagenicity of fullerene as a mathematical function of different conditions.

作者信息

Toropova Alla P, Toropov Andrey A, Veselinović Aleksandar M, Veselinović Jovana B, Benfenati Emilio, Leszczynska Danuta, Leszczynski Jerzy

机构信息

IRCCS-I stituto di Ricerche Farmacologiche Mario Negri, Via La Masa 19, Milano, Italy.

IRCCS-I stituto di Ricerche Farmacologiche Mario Negri, Via La Masa 19, Milano, Italy.

出版信息

Ecotoxicol Environ Saf. 2016 Feb;124:32-36. doi: 10.1016/j.ecoenv.2015.09.038. Epub 2015 Oct 13.

Abstract

The experimental data on the bacterial reverse mutation test (under various conditions) on C60 nanoparticles for the cases (i) TA100, and (ii) WP2uvrA/pkM101 are examined as endpoints. By means of the optimal descriptors calculated with the Monte Carlo method a mathematical model of these endpoints has been built up. The models are a mathematical function of eclectic data such as (i) dose (g/plate); (ii) metabolic activation (i.e. with mix S9 or without mix S9); and (iii) illumination (i.e. darkness or irradiation). The eclectic data on different conditions were represented by so-called quasi-SMILES. In contrast to the traditional SMILES which are representation of molecular structure, the quasi-SMILES are representation of conditions by sequence of symbols. The calculations were carried out with the CORAL software, available on the Internet at http://www.insilico.eu/coral. The main idea of the suggested descriptors is the accumulation of all available eclectic information in the role of logical and digital basis for building up a model. The computational experiments have shown that the described approach can be a tool to build up models of mutagenicity of fullerene under different conditions.

摘要

以C60纳米颗粒在(i)TA100和(ii)WP2uvrA/pkM101情况下的细菌回复突变试验(在各种条件下)的实验数据作为端点进行研究。通过用蒙特卡罗方法计算的最佳描述符,建立了这些端点的数学模型。这些模型是综合数据的数学函数,这些数据包括(i)剂量(微克/平板);(ii)代谢活化(即使用S9混合液或不使用S9混合液);以及(iii)光照(即黑暗或照射)。不同条件下的综合数据由所谓的准SMILES表示。与表示分子结构的传统SMILES不同,准SMILES是通过符号序列表示条件。计算使用可在互联网http://www.insilico.eu/coral上获取的CORAL软件进行。所建议描述符的主要思想是积累所有可用的综合信息,作为建立模型的逻辑和数字基础。计算实验表明,所描述的方法可以作为建立富勒烯在不同条件下致突变性模型的工具。

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