中国猪源三角洲冠状病毒毒株CH/SXD1/2015的全基因组特征分析
Full-Length Genome Characterization of Chinese Porcine Deltacoronavirus Strain CH/SXD1/2015.
作者信息
Chen Fangzhou, Zhu Yinxing, Wu Meizhou, Ku Xugang, Yao Li, He Qigai
机构信息
State Key Laboratory of Agricultural Microbiology, College of Veterinary Medicine, Huazhong Agricultural University, Wuhan, China.
State Key Laboratory of Agricultural Microbiology, College of Veterinary Medicine, Huazhong Agricultural University, Wuhan, China
出版信息
Genome Announc. 2015 Oct 29;3(5):e01284-15. doi: 10.1128/genomeA.01284-15.
Abstract
A porcine deltacoronavirus (PDCoV) was identified in the Chinese mainland and found to be closely related to Hong Kong strain HKU15-155 but differed from PDCoV strains in the United States and South Korea. The complete genome of PDCoV strain CH/SXD1/201 was sequenced and analyzed to further characterize PDCoV in Chinese swine.
摘要
在中国内地鉴定出一种猪德尔塔冠状病毒（PDCoV），发现它与香港毒株HKU15 - 155密切相关，但与美国和韩国的PDCoV毒株不同。对PDCoV毒株CH/SXD1/201的全基因组进行了测序和分析，以进一步鉴定中国猪群中的PDCoV特性。
相似文献
1
Full-Length Genome Characterization of Chinese Porcine Deltacoronavirus Strain CH/SXD1/2015.中国猪源三角洲冠状病毒毒株CH/SXD1/2015的全基因组特征分析
Genome Announc. 2015 Oct 29;3(5):e01284-15. doi: 10.1128/genomeA.01284-15.
2
Prevalence, complete genome sequencing and phylogenetic analysis of porcine deltacoronavirus in South Korea, 2014-2016.2014 - 2016年韩国猪三角洲冠状病毒的流行情况、全基因组测序及系统发育分析
Transbound Emerg Dis. 2017 Oct;64(5):1364-1370. doi: 10.1111/tbed.12690. Epub 2017 Jul 30.
3
Genomic characterization and pathogenicity of porcine deltacoronavirus strain CHN-HG-2017 from China.来自中国的猪德尔塔冠状病毒株CHN-HG-2017的基因组特征与致病性
Arch Virol. 2019 Feb;164(2):413-425. doi: 10.1007/s00705-018-4081-6. Epub 2018 Oct 30.
4
Complete Genome Characterization of Korean Porcine Deltacoronavirus Strain KOR/KNU14-04/2014.韩国猪德尔塔冠状病毒株KOR/KNU14-04/2014的全基因组特征分析
Genome Announc. 2014 Nov 26;2(6):e01191-14. doi: 10.1128/genomeA.01191-14.
5
Complete Genome Sequence of Porcine Deltacoronavirus Strain CH/Sichuan/S27/2012 from Mainland China.来自中国大陆的猪德尔塔冠状病毒株CH/Sichuan/S27/2012的全基因组序列
Genome Announc. 2015 Sep 3;3(5):e00945-15. doi: 10.1128/genomeA.00945-15.
6
Newly Emerged Porcine Deltacoronavirus Associated With Diarrhoea in Swine in China: Identification, Prevalence and Full-Length Genome Sequence Analysis.中国新出现的与猪腹泻相关的猪三角洲冠状病毒：鉴定、流行情况及全基因组序列分析
Transbound Emerg Dis. 2015 Dec;62(6):575-80. doi: 10.1111/tbed.12399. Epub 2015 Aug 6.
7
A Highly Pathogenic Strain of Porcine Deltacoronavirus Caused Watery Diarrhea in Newborn Piglets.一种高致病性猪德尔塔冠状病毒可引起仔猪水样腹泻。
Virol Sin. 2018 Apr;33(2):131-141. doi: 10.1007/s12250-018-0003-8. Epub 2018 Mar 22.
8
Complete Genome Characterization of Novel Chinese Porcine Deltacoronavirus Strain SD.新型中国猪源三角洲冠状病毒SD株的全基因组特征分析
Genome Announc. 2017 Oct 5;5(40):e00930-17. doi: 10.1128/genomeA.00930-17.
9
The first detection and full-length genome sequence of porcine deltacoronavirus isolated in Lao PDR.在老挝人民民主共和国分离出的猪三角洲冠状病毒的首次检测及全基因组序列
Arch Virol. 2016 Oct;161(10):2909-11. doi: 10.1007/s00705-016-2983-8. Epub 2016 Jul 16.
10
The detection and phylogenetic analysis of porcine deltacoronavirus from Guangdong Province in Southern China.从中国南方广东省检测到猪德尔塔冠状病毒并进行系统进化分析。
Transbound Emerg Dis. 2018 Feb;65(1):166-173. doi: 10.1111/tbed.12644. Epub 2017 Mar 27.
引用本文的文献
1
Genetic and Pathogenic Characterization of a Porcine Deltacoronavirus Strain Isolated in Zhejiang Province, China.中国浙江省分离的一株猪德尔塔冠状病毒的遗传与致病性特征分析
Transbound Emerg Dis. 2025 May 18;2025:4084814. doi: 10.1155/tbed/4084814. eCollection 2025.
2
Prevention and Control of Swine Enteric Coronaviruses in China: A Review of Vaccine Development and Application.中国猪肠道冠状病毒的防控：疫苗研发与应用综述
Vaccines (Basel). 2023 Dec 21;12(1):11. doi: 10.3390/vaccines12010011.
3
Genetic Characterization and Evolution of Porcine Deltacoronavirus Isolated in the Republic of Korea in 2022.2022年在大韩民国分离出的猪德尔塔冠状病毒的基因特征与进化
Pathogens. 2023 May 7;12(5):686. doi: 10.3390/pathogens12050686.
4
Establishment of a recombinase polymerase amplification (RPA) fluorescence assay for the detection of swine acute diarrhea syndrome coronavirus (SADS-CoV).建立一种重组酶聚合酶扩增（RPA）荧光检测法，用于检测猪急性腹泻综合征冠状病毒（SADS-CoV）。
BMC Vet Res. 2022 Oct 11;18(1):369. doi: 10.1186/s12917-022-03465-4.
5
The N-terminal Subunit of the Porcine Deltacoronavirus Spike Recombinant Protein (S1) Does Not Serologically Cross-react with Other Porcine Coronaviruses.猪德尔塔冠状病毒刺突重组蛋白（S1）的N端亚基与其他猪冠状病毒无血清学交叉反应。
Pathogens. 2022 Aug 13;11(8):910. doi: 10.3390/pathogens11080910.
6
Modulation of Innate Antiviral Immune Response by Porcine Enteric Coronavirus.猪肠道冠状病毒对先天性抗病毒免疫反应的调节
Front Microbiol. 2022 Feb 14;13:845137. doi: 10.3389/fmicb.2022.845137. eCollection 2022.
7
Porcine Deltacoronaviruses: Origin, Evolution, Cross-Species Transmission and Zoonotic Potential.猪德尔塔冠状病毒：起源、进化、跨物种传播及人畜共患病潜力
Pathogens. 2022 Jan 9;11(1):79. doi: 10.3390/pathogens11010079.
8
Porcine deltacoronavirus and its prevalence in China: a review of epidemiology, evolution, and vaccine development.猪德尔塔冠状病毒及其在中国的流行情况：流行病学、进化及疫苗研发综述
Arch Virol. 2021 Nov;166(11):2975-2988. doi: 10.1007/s00705-021-05226-4. Epub 2021 Sep 15.
9
The Roles of Apoptosis in Swine Response to Viral Infection and Pathogenesis of Swine Enteropathogenic Coronaviruses.细胞凋亡在猪对病毒感染的反应及猪肠道致病性冠状病毒发病机制中的作用
Front Vet Sci. 2020 Nov 26;7:572425. doi: 10.3389/fvets.2020.572425. eCollection 2020.
10
Rapid and efficient detection methods of pathogenic swine enteric coronaviruses.快速有效的猪肠道冠状病毒病原检测方法。
Appl Microbiol Biotechnol. 2020 Jul;104(14):6091-6100. doi: 10.1007/s00253-020-10645-5. Epub 2020 May 19.
本文引用的文献
1
Origin, evolution, and virulence of porcine deltacoronaviruses in the United States.美国猪德尔塔冠状病毒的起源、进化及毒力
mBio. 2015 Mar 10;6(2):e00064. doi: 10.1128/mBio.00064-15.
2
Isolation and characterization of porcine deltacoronavirus from pigs with diarrhea in the United States.从美国腹泻猪中分离和鉴定猪德尔塔冠状病毒
J Clin Microbiol. 2015 May;53(5):1537-48. doi: 10.1128/JCM.00031-15. Epub 2015 Mar 4.
3
Complete Genome Characterization of Korean Porcine Deltacoronavirus Strain KOR/KNU14-04/2014.韩国猪德尔塔冠状病毒株KOR/KNU14-04/2014的全基因组特征分析
Genome Announc. 2014 Nov 26;2(6):e01191-14. doi: 10.1128/genomeA.01191-14.
4
Porcine coronavirus HKU15 detected in 9 US states, 2014.2014年，在美国9个州检测到猪冠状病毒HKU15。
Emerg Infect Dis. 2014 Sep;20(9):1594-5. doi: 10.3201/eid2009.140756.
5
Rapid detection, complete genome sequencing, and phylogenetic analysis of porcine deltacoronavirus.猪德尔塔冠状病毒的快速检测、全基因组测序及系统发育分析
Emerg Infect Dis. 2014 Aug;20(8):1347-50. doi: 10.3201/eid2008.140526.
6
Detection and genetic characterization of deltacoronavirus in pigs, Ohio, USA, 2014.2014年美国俄亥俄州猪群中德尔塔冠状病毒的检测与基因特征分析
Emerg Infect Dis. 2014 Jul;20(7):1227-30. doi: 10.3201/eid2007.140296.
7
Discovery of seven novel Mammalian and avian coronaviruses in the genus deltacoronavirus supports bat coronaviruses as the gene source of alphacoronavirus and betacoronavirus and avian coronaviruses as the gene source of gammacoronavirus and deltacoronavirus.在属中发现了七种新型哺乳动物和禽冠状病毒，支持了冠状病毒作为甲型冠状病毒和乙型冠状病毒的基因来源，以及禽冠状病毒作为丙型冠状病毒和丁型冠状病毒的基因来源。
J Virol. 2012 Apr;86(7):3995-4008. doi: 10.1128/JVI.06540-11. Epub 2012 Jan 25.
8
Outbreak of porcine epidemic diarrhea in suckling piglets, China.中国仔猪发生猪流行性腹泻疫情。
Emerg Infect Dis. 2012 Jan;18(1):161-3. doi: 10.3201/eid1801.111259.
Zotero 插件