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利用核糖体RNA内部转录间隔区1快速鉴定棉铃虫和烟青虫(鳞翅目:夜蛾科)

Rapid identification of Helicoverpa armigera and Helicoverpa zea (Lepidoptera: Noctuidae) using ribosomal RNA internal transcribed spacer 1.

作者信息

Perera Omaththage P, Allen Kerry C, Jain Devendra, Purcell Matthew, Little Nathan S, Luttrell Randall G

机构信息

USDA-ARS Southern Insect Management Research Unit, Stoneville, MS 38776

USDA-ARS Southern Insect Management Research Unit, Stoneville, MS 38776.

出版信息

J Insect Sci. 2015 Oct 29;15(1). doi: 10.1093/jisesa/iev137. Print 2015.

Abstract

Rapid identification of invasive species is crucial for deploying management strategies to prevent establishment. Recent Helicoverpa armigera (Hübner) invasions and subsequent establishment in South America has increased the risk of this species invading North America. Morphological similarities make differentiation of H. armigera from the native Helicoverpa zea (Boddie) difficult. Characteristics of adult male genitalia and nucleotide sequence differences in mitochondrial DNA are two of the currently available methods to differentiate these two species. However, current methods are likely too slow to be employed as rapid detection methods. In this study, conserved differences in the internal transcribed spacer 1 (ITS1) of the ribosomal RNA genes were used to develop species-specific oligonucleotide primers that amplified ITS1 fragments of 147 and 334 bp from H. armigera and H. zea, respectively. An amplicon (83 bp) from a conserved region of 18S ribosomal RNA subunit served as a positive control. Melting temperature differences in ITS1 amplicons yielded species-specific dissociation curves that could be used in high resolution melt analysis to differentiate the two Helicoverpa species. In addition, a rapid and inexpensive procedure for obtaining amplifiable genomic DNA from a small amount of tissue was identified. Under optimal conditions, the process was able to detect DNA from one H. armigera leg in a pool of 25 legs. The high resolution melt analysis combined with rapid DNA extraction could be used as an inexpensive method to genetically differentiate large numbers of H. armigera and H. zea using readily available reagents.

摘要

快速识别入侵物种对于部署管理策略以防止其定殖至关重要。最近棉铃虫(Helicoverpa armigera (Hübner))入侵南美洲并随后定殖,增加了该物种入侵北美的风险。形态学上的相似性使得区分棉铃虫和本土的美洲棉铃虫(Helicoverpa zea (Boddie))变得困难。成年雄性生殖器特征和线粒体DNA中的核苷酸序列差异是目前可用于区分这两个物种的两种方法。然而,目前的方法可能太慢,无法用作快速检测方法。在本研究中,核糖体RNA基因内部转录间隔区1(ITS1)的保守差异被用于开发物种特异性寡核苷酸引物,这些引物分别从棉铃虫和美洲棉铃虫中扩增出147和334 bp的ITS1片段。来自18S核糖体RNA亚基保守区域的一个扩增子(83 bp)用作阳性对照。ITS1扩增子的熔解温度差异产生了物种特异性解离曲线,可用于高分辨率熔解分析以区分这两种棉铃虫。此外,还确定了一种从少量组织中获得可扩增基因组DNA的快速且廉价的方法。在最佳条件下,该方法能够在25条腿的混合样本中检测到来自一条棉铃虫腿的DNA。高分辨率熔解分析与快速DNA提取相结合,可以作为一种使用现成试剂对大量棉铃虫和美洲棉铃虫进行基因区分的廉价方法。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1256/4625950/19c3057db23b/iev137f1p.jpg

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