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肝素酶的功能和结构特征。

Functional and structural characterization of a heparanase.

机构信息

Institute for Glycomics, Griffith University, Gold Coast Campus, Southport, Queensland, Australia.

出版信息

Nat Chem Biol. 2015 Dec;11(12):955-7. doi: 10.1038/nchembio.1956. Epub 2015 Nov 2.

DOI:10.1038/nchembio.1956
PMID:26565989
Abstract

We report the structural and functional characterization of a novel heparanase (BpHep) from the invasive pathogenic bacterium Burkholderia pseudomallei (Bp), showing ∼24% sequence identity with human heparanase (hHep). Site-directed mutagenesis studies confirmed the active site resi-dues essential for activity, and we found that BpHep has specificity for heparan sulfate. Finally, we describe the first heparanase X-ray crystal structure, which provides new insight into both substrate recognition and inhibitor design.

摘要

我们报告了一种新型肝素酶(BpHep)的结构和功能特征,该酶来自侵袭性病原菌伯克霍尔德菌假单胞菌(Bp),与人类肝素酶(hHep)具有约 24%的序列同一性。定点突变研究证实了活性位点残基对活性是必需的,我们发现 BpHep 对硫酸乙酰肝素具有特异性。最后,我们描述了第一个肝素酶 X 射线晶体结构,为底物识别和抑制剂设计提供了新的见解。

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2
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本文引用的文献

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2
Burkholderia pseudomallei penetrates the brain via destruction of the olfactory and trigeminal nerves: implications for the pathogenesis of neurological melioidosis.类鼻疽伯克霍尔德菌通过破坏嗅神经和三叉神经侵入大脑:对神经型类鼻疽发病机制的影响。
mBio. 2014 Apr 15;5(2):e00025. doi: 10.1128/mBio.00025-14.
3
Synthesis of a pseudo-disaccharide library and its application to the characterisation of the heparanase catalytic site.
乙酰肝素酶在癌症进展中的作用:结构、底物识别及治疗潜力
Front Chem. 2022 Sep 9;10:926353. doi: 10.3389/fchem.2022.926353. eCollection 2022.
4
Mechanism-based heparanase inhibitors reduce cancer metastasis in vivo.基于机制的肝素酶抑制剂可减少体内癌症转移。
Proc Natl Acad Sci U S A. 2022 Aug 2;119(31):e2203167119. doi: 10.1073/pnas.2203167119. Epub 2022 Jul 26.
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Targeting the "sweet spot" in septic shock - A perspective on the endothelial glycocalyx regulating proteins Heparanase-1 and -2.靶向脓毒症休克的“甜蜜点”——关于内皮糖萼调节蛋白乙酰肝素酶-1和-2的观点
Matrix Biol Plus. 2021 Dec 2;12:100095. doi: 10.1016/j.mbplus.2021.100095. eCollection 2021 Dec.
6
Mass Spectrometry-Based Techniques to Elucidate the Sugar Code.基于质谱的技术来阐明糖码。
Chem Rev. 2022 Apr 27;122(8):7840-7908. doi: 10.1021/acs.chemrev.1c00380. Epub 2021 Sep 7.
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Angew Chem Int Ed Engl. 2021 Jul 26;60(31):17123-17130. doi: 10.1002/anie.202105019. Epub 2021 Jun 27.
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Mol Cell Proteomics. 2021;20:100025. doi: 10.1074/mcp.R120.002267. Epub 2021 Jan 6.
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Biopolymers. 2012 Jan;97(1):21-34. doi: 10.1002/bip.21696. Epub 2011 Jul 21.
10
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Glycobiology. 2012 Jan;22(1):35-55. doi: 10.1093/glycob/cwr095. Epub 2011 Jul 11.