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从基因组到田间和市场的 10 年精彩历程:基因组辅助培育鹰嘴豆、鸽豆和落花生的一些成功案例。

Exciting journey of 10 years from genomes to fields and markets: Some success stories of genomics-assisted breeding in chickpea, pigeonpea and groundnut.

机构信息

International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Hyderabad 502324, India.

出版信息

Plant Sci. 2016 Jan;242:98-107. doi: 10.1016/j.plantsci.2015.09.009. Epub 2015 Sep 10.

Abstract

Legume crops such as chickpea, pigeonpea and groundnut, mostly grown in marginal environments, are the major source of nutrition and protein to the human population in Asia and Sub-Saharan Africa. These crops, however, have a low productivity, mainly due to their exposure to several biotic and abiotic stresses in the marginal environments. Until 2005, these crops had limited genomics resources and molecular breeding was very challenging. During the last decade (2005-2015), ICRISAT led demand-driven innovations in genome science and translated the massive genome information in breeding. For instance, large-scale genomic resources including draft genome assemblies, comprehensive genetic and physical maps, thousands of SSR markers, millions of SNPs, several high-throughput as well as low cost marker genotyping platforms have been developed in these crops. After mapping several breeding related traits, several success stories of translational genomics have become available in these legumes. These include development of superior lines with enhanced drought tolerance in chickpea, enhanced and pyramided resistance to Fusarium wilt and Ascochyta blight in chickpea, enhanced resistance to leaf rust in groundnut, improved oil quality in groundnut and utilization of markers for assessing purity of hybrids/parental lines in pigeonpea. Some of these stories together with future prospects have been discussed.

摘要

小扁豆、兵豆和落花生等豆类作物主要生长在边缘环境中,它们是亚洲和撒哈拉以南非洲地区人类营养和蛋白质的主要来源。然而,由于这些作物在边缘环境中面临多种生物和非生物胁迫,其生产力较低。直到 2005 年,这些作物的基因组资源有限,分子育种极具挑战性。在过去的十年中(2005-2015 年),国际半干旱热带作物研究所(ICRISAT)引领了以需求为导向的基因组科学创新,并将大量基因组信息转化为育种应用。例如,在这些作物中开发了大规模的基因组资源,包括草图基因组组装、综合遗传和物理图谱、数千个 SSR 标记、数百万个 SNPs、几种高通量和低成本的标记基因型平台。在对几个与育种相关的性状进行定位后,这些豆类作物中的转化基因组学已经取得了一些成功案例。其中包括培育出耐旱性更强的小扁豆优良品系,增强了小扁豆对枯萎病和炭疽病的抗性和基因叠加,提高了落花生对叶锈病的抗性,改善了落花生的油质,以及利用标记评估 pigeonpea 杂种/亲本系的纯度。本文将讨论其中的一些案例以及未来的前景。

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