Wilkins David M, Dattani Nikesh S
Physical and Theoretical Chemistry Laboratory, Oxford University , South Parks Road, Oxford, OX1 3QZ, United Kingdom.
Quantum Chemistry Laboratory, Department of Chemistry, Kyoto University , 606-8502, Kyoto, Japan.
J Chem Theory Comput. 2015 Jul 14;11(7):3411-9. doi: 10.1021/ct501066k.
We develop and present an improvement to the conventional technique for solving the Hierarchical Equations of Motion (HEOM), which can reduce the memory cost by up to 75% while retaining the same (or even better) convergence rate and accuracy. This allows for a full calculation of the population dynamics of the 24-site FMO trimer for long time scales with very little effort, and we present the first fully converged, exact results for the 7-site subsystem of the monomer, and for the full 24-site trimer. We then show where our exact 7-site results deviate from the approximation of Ishizaki and Fleming [A. Ishizaki and G. R. Fleming, Proc. Natl. Acad. Sci. U.S.A., 2009, 106, 17255]. Our exact results are then compared to calculations using the incoherent Förster theory, and it is found that the time scale of energy transfer is roughly the same, regardless of whether or not coherence is considered. This means that coherence is not likely to improve the efficiency of the transfer. In fact, the incoherent theory often tends to overpredict the rates of energy transfer, suggesting that, in some cases, quantum coherence may actually slow the photosynthetic process.
我们开发并提出了一种对传统技术的改进方法,用于求解运动层次方程(HEOM),该方法可将内存成本降低多达75%,同时保持相同(甚至更好)的收敛速度和精度。这使得我们能够轻松地对24个位点的FMO三聚体的长时间尺度上的布居动力学进行完整计算,并且我们给出了单体7个位点子系统以及完整24个位点三聚体的首个完全收敛的精确结果。然后,我们展示了我们精确的7个位点结果与Ishizaki和Fleming [A. Ishizaki和G. R. Fleming,《美国国家科学院院刊》,2009,106,17255] 的近似结果的偏差之处。接着,我们将精确结果与使用非相干福斯特理论的计算结果进行比较,发现无论是否考虑相干性,能量转移的时间尺度大致相同。这意味着相干性不太可能提高转移效率。实际上,非相干理论往往倾向于高估能量转移速率,这表明在某些情况下,量子相干性实际上可能会减缓光合作用过程。