Barone Vincenzo, Biczysko Malgorzata, Bloino Julien, Cimino Paola, Penocchio Emanuele, Puzzarini Cristina
Scuola Normale Superiore, Piazza dei Cavalieri 7, I-56126 Pisa, Pisa, Italy.
Consiglio Nazionale delle Ricerche, Istituto di Chimica dei Composti OrganoMetallici (ICCOM-CNR), UOS di Pisa, Area della Ricerca CNR, Via G. Moruzzi 1, I-56124 Pisa, Pisa, Italy.
J Chem Theory Comput. 2015 Sep 8;11(9):4342-63. doi: 10.1021/acs.jctc.5b00580. Epub 2015 Aug 7.
The structures and relative stabilities as well as the rotational and vibrational spectra of the three low-energy conformers of pyruvic acid (PA) have been characterized using a state-of-the-art quantum-mechanical approach designed for flexible molecules. By making use of the available experimental rotational constants for several isotopologues of the most stable PA conformer, Tc-PA, the semiexperimental equilibrium structure has been derived. The latter provides a reference for the pure theoretical determination of the equilibrium geometries for all conformers, thus confirming for these structures an accuracy of 0.001 Å and 0.1 deg for bond lengths and angles, respectively. Highly accurate relative energies of all conformers (Tc-, Tt-, and Ct-PA) and of the transition states connecting them are provided along with the thermodynamic properties at low and high temperatures, thus leading to conformational enthalpies accurate to 1 kJ mol(-1). Concerning microwave spectroscopy, rotational constants accurate to about 20 MHz are provided for the Tt- and Ct-PA conformers, together with the computed centrifugal-distortion constants and dipole moments required to simulate their rotational spectra. For Ct-PA, vibrational frequencies in the mid-infrared region accurate to 10 cm(-1) are reported along with theoretical estimates for the transitions in the near-infrared range, and the corresponding infrared spectrum including fundamental transitions, overtones, and combination bands has been simulated. In addition to the new data described above, theoretical results for the Tc- and Tt-PA conformers are compared with all available experimental data to further confirm the accuracy of the hybrid coupled-cluster/density functional theory (CC/DFT) protocol applied in the present study. Finally, we discuss in detail the accuracy of computational models fully based on double-hybrid DFT functionals (mainly at the B2PLYP/aug-cc-pVTZ level) that avoid the use of very expensive CC calculations.
使用一种专门为柔性分子设计的先进量子力学方法,对丙酮酸(PA)的三种低能构象异构体的结构、相对稳定性以及旋转和振动光谱进行了表征。通过利用最稳定的PA构象异构体Tc-PA的几种同位素变体的现有实验旋转常数,推导出了半实验平衡结构。后者为所有构象异构体平衡几何结构的纯理论测定提供了参考,从而证实了这些结构的键长和键角精度分别为0.001 Å和0.1°。提供了所有构象异构体(Tc-、Tt-和Ct-PA)以及连接它们的过渡态的高精度相对能量,以及低温和高温下的热力学性质,从而得到了精确到1 kJ mol⁻¹的构象焓。关于微波光谱,为Tt-和Ct-PA构象异构体提供了精确到约20 MHz的旋转常数,以及模拟其旋转光谱所需的计算离心畸变常数和偶极矩。对于Ct-PA,报告了中红外区域精确到10 cm⁻¹的振动频率,以及近红外范围内跃迁的理论估计值,并模拟了包括基频跃迁、泛音和组合带的相应红外光谱。除了上述新数据外,还将Tc-和Tt-PA构象异构体的理论结果与所有可用实验数据进行了比较,以进一步证实本研究中应用的混合耦合簇/密度泛函理论(CC/DFT)协议的准确性。最后,我们详细讨论了完全基于双杂化DFT泛函(主要在B2PLYP/aug-cc-pVTZ水平)的计算模型的准确性,该模型避免了使用非常昂贵的CC计算。