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使用时间尺度分析研究受体酶活性。

Investigating receptor enzyme activity using time-scale analysis.

作者信息

You Tao, Yue Hong

机构信息

Computational Biology, Discovery Sciences, Innovative Medicines & Early Development, AstraZeneca, Alderley Park, Cheshire, SK10 4TG, UK.

Department of Electronic and Electrical Engineering, University of Strathclyde, Glasgow, G1 1XW, UK.

出版信息

IET Syst Biol. 2015 Dec;9(6):268-76. doi: 10.1049/iet-syb.2015.0037.

Abstract

At early drug discovery, purified protein-based assays are often used to characterise compound potency. In the context of dose response, it is often perceived that a time-independent inhibitor is reversible and a time-dependent inhibitor is irreversible. The legitimacy of this argument is investigated using a simple kinetics model, where it is revealed by model-based analytical analysis and numerical studies that dose response of an irreversible inhibitor may appear time-independent under certain parametric conditions. Hence, the observation of time-independence cannot be used as sole evidence for identification of inhibitor reversibility. It has also been discussed how the synthesis and degradation of a target receptor affect drug inhibition in an in vitro cell-based assay setting. These processes may also influence dose response of an irreversible inhibitor in such a way that it appears time-independent under certain conditions. Furthermore, model-based steady-state analysis reveals the complexity nature of the drug-receptor process.

摘要

在药物发现早期,基于纯化蛋白的检测方法常被用于表征化合物的效力。在剂量反应的背景下,人们通常认为非时间依赖性抑制剂是可逆的,而时间依赖性抑制剂是不可逆的。使用一个简单的动力学模型对这一论点的合理性进行了研究,通过基于模型的分析和数值研究发现,在某些参数条件下,不可逆抑制剂的剂量反应可能表现为非时间依赖性。因此,不能将非时间依赖性的观察结果作为鉴定抑制剂可逆性的唯一证据。还讨论了在基于体外细胞的检测环境中,靶受体的合成和降解如何影响药物抑制作用。这些过程也可能以某种方式影响不可逆抑制剂的剂量反应,使其在某些条件下表现为非时间依赖性。此外,基于模型的稳态分析揭示了药物 - 受体过程的复杂性。

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本文引用的文献

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What happened to the modeling and simulation revolution?建模与仿真革命怎么了?
Clin Pharmacol Ther. 2014 Oct;96(4):416-7. doi: 10.1038/clpt.2014.123.

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