Préchoux Aurélie, Genicot Sabine, Rogniaux Hélène, Helbert William
Sorbonne Universités, UPMC Univ Paris 06, UMR 8227, Integrative Biology of Marine Models, Station Biologique de Roscoff, 29680, Roscoff, France.
CNRS, UMR 8227, Integrative Biology of Marine Models, Station Biologique de Roscoff, 29680, Roscoff, France.
Mar Biotechnol (NY). 2016 Feb;18(1):133-43. doi: 10.1007/s10126-015-9675-3. Epub 2015 Nov 19.
Carrageenans are sulfated galactans that are widely used in industrial applications for their thickening and gelling properties, which vary according to the amount and distribution of ester sulfate groups along the galactan backbone. To determine and direct the sulfation of κ-carrageenan moieties, we purified an endo-κ-carrageenan sulfatase (Q15XH1 accession in UniprotKB) from Pseudoalteromonas atlantica T6c extracts. Based on sequence analyses and exploration of the genomic environment of Q15XH1, we discovered and characterized a second endo-κ-carrageenan sulfatase (Q15XG7 accession in UniprotKB). Both enzymes convert κ-carrageenan into a hybrid, furcellaran-like κ-/β-carrageenan. We compared the protein sequences of these two new κ-carrageenan sulfatases and that of a previously reported ι-carrageenan sulfatase with other predicted sulfatases in the P. atlantica genome, revealing the existence of additional new carrageenan sulfatases.
角叉菜胶是硫酸化半乳聚糖,因其具有增稠和胶凝特性而被广泛用于工业应用,这些特性会根据硫酸酯基团沿半乳聚糖主链的数量和分布而有所不同。为了确定并指导κ-角叉菜胶部分的硫酸化作用,我们从大西洋假交替单胞菌T6c提取物中纯化了一种内切κ-角叉菜胶硫酸酯酶(在UniprotKB中的登录号为Q15XH1)。基于序列分析以及对Q15XH1基因组环境的探索,我们发现并鉴定了第二种内切κ-角叉菜胶硫酸酯酶(在UniprotKB中的登录号为Q15XG7)。这两种酶都能将κ-角叉菜胶转化为一种类似红藻多糖的κ-/β-角叉菜胶混合物。我们将这两种新的κ-角叉菜胶硫酸酯酶的蛋白质序列以及之前报道的ι-角叉菜胶硫酸酯酶的序列与大西洋假交替单胞菌基因组中其他预测的硫酸酯酶进行了比较,发现了其他新的角叉菜胶硫酸酯酶的存在。