Korth Martin, Pitoňák Michal, Řezáč Jan, Hobza Pavel
Institute of Organic Chemistry and Biochemistry, Academy of Sciences of the Czech Republic and Center for Biomolecules and Complex Systems, 16610 Prague 6, Czech Republic, Department of Physical and Theoretical Chemistry, Faculty of Natural Sciences, Comenius University, 84215 Bratislava 4, Slovak Republic, and Department of Physical Chemistry, Palacky University, 771 46 Olomouc, Czech Republic.
J Chem Theory Comput. 2010 Jan 12;6(1):344-52. doi: 10.1021/ct900541n. Epub 2009 Dec 10.
Semiempirical methods could offer a feasible compromise between ab initio and empirical approaches for the calculation of large molecules with biological relevance. A key problem for attempts in this direction is the rather bad performance of current semiempirical methods for noncovalent interactions, especially hydrogen-bonding. On the basis of the recently introduced PM6-DH method, which includes empirical corrections for dispersion (D) and hydrogen-bond (H) interactions, we have developed an improved and transferable H-bonding correction for semiempirical quantum chemical methods. The performance of the improved correction is evaluated for PM6, AM1, OM3, and SCC-DFTB (enhanced by standard empirical dispersion corrections) with several test sets for noncovalent interactions and is shown to reach the quality of current DFT-D approaches for these types of problems.
半经验方法可为计算具有生物学相关性的大分子提供一种介于从头算和经验方法之间的可行折衷方案。朝这个方向努力的一个关键问题是当前半经验方法在非共价相互作用尤其是氢键方面的表现相当糟糕。基于最近引入的PM6-DH方法(其中包括对色散(D)和氢键(H)相互作用的经验校正),我们为半经验量子化学方法开发了一种改进的、可转移的氢键校正。利用几个非共价相互作用测试集,对PM6、AM1、OM3和SCC-DFTB(通过标准经验色散校正增强)评估了改进校正的性能,结果表明对于这类问题,其达到了当前DFT-D方法的质量。