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Exome and regulatory element sequencing of neuromyelitis optica patients.

作者信息

Siuko Mika, Valori Miko, Kivelä Tero, Setälä Kirsi, Morin Andreanne, Kwan Tony, Pastinen Tomi, Tienari Pentti

机构信息

Department of Ophthalmology, Helsinki University Central Hospital, Helsinki, Finland.

Molecular Neurology Programme, Research Program Unit, Biomedicum, University of Helsinki, Helsinki, Finland.

出版信息

J Neuroimmunol. 2015 Dec 15;289:139-42. doi: 10.1016/j.jneuroim.2015.11.002. Epub 2015 Nov 3.

DOI:10.1016/j.jneuroim.2015.11.002
PMID:26616883
Abstract

Neuromyelitis optica (NMO) is rare in Finland. To identify rare genetic variants contributing to NMO risk we performed whole exome, HLA and regulatory region sequencing in all ascertained cases during 2005-2013 (n=5) in a Southern Finnish population of 1.6 million. There were no rare variant shared by all patients. Four missense variants were shared by two patients in C3ORF20, PDZD2, C5ORF47 and ZNF606. Another PDZD2 variant was found in a third patient. In the non-coding sequence two predictably functional rare variants were shared by two patients. Our results do not support a homogeneous genetic etiology of NMO in Finland.

摘要

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