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聚丙二醇和聚乙二醇降解鞘氨醇单胞菌EY-1菌株的全基因组序列

Complete Genome Sequence of Polypropylene Glycol- and Polyethylene Glycol-Degrading Sphingopyxis macrogoltabida Strain EY-1.

作者信息

Ohtsubo Yoshiyuki, Nagata Yuji, Numata Mitsuru, Tsuchikane Kieko, Hosoyama Akira, Yamazoe Atsushi, Tsuda Masataka, Fujita Nobuyuki, Kawai Fusako

机构信息

Department of Environmental Life Sciences, Graduate School of Life Sciences, Tohoku University, Sendai, Japan

Department of Environmental Life Sciences, Graduate School of Life Sciences, Tohoku University, Sendai, Japan.

出版信息

Genome Announc. 2015 Dec 3;3(6):e01399-15. doi: 10.1128/genomeA.01399-15.

Abstract

Strain EY-1 was isolated from a microbial consortium growing on a random polymer of ethylene oxide and propylene oxide. Strain EY-1 grew on polyethylene glycol and polypropylene glycol and identified as Sphingopyxis macrogoltabida. Here, we report the complete genome sequence of Sphingopyxis macrogoltabida EY-1. The genome of strain EY-1 is comprised of a 4.76-Mb circular chromosome, and five plasmids. The whole finishing was conducted in silico, with aids of computational tools GenoFinisher and AceFileViewer. Strain EY-1 is available from Biological Resource Center, National Institute of Technology and Evaluation (Tokyo, Japan) (NITE).

摘要

菌株EY-1是从一个以环氧乙烷和环氧丙烷的无规聚合物为食的微生物群落中分离出来的。菌株EY-1能在聚乙二醇和聚丙二醇上生长,并被鉴定为大鞘氨醇单胞菌(Sphingopyxis macrogoltabida)。在此,我们报告大鞘氨醇单胞菌EY-1的完整基因组序列。菌株EY-1的基因组由一条4.76兆碱基的环状染色体和五个质粒组成。借助计算工具GenoFinisher和AceFileViewer,在计算机上完成了整个基因组的组装。菌株EY-1可从日本国立技术与评估研究所生物资源中心(东京,日本)(NITE)获得。

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