• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

利用重组天冬酰胺内肽酶实现线性肽的高效主链环化。

Efficient backbone cyclization of linear peptides by a recombinant asparaginyl endopeptidase.

作者信息

Harris Karen S, Durek Thomas, Kaas Quentin, Poth Aaron G, Gilding Edward K, Conlan Brendon F, Saska Ivana, Daly Norelle L, van der Weerden Nicole L, Craik David J, Anderson Marilyn A

机构信息

Department of Biochemistry and Genetics, La Trobe Institute for Molecular Science, La Trobe University, Melbourne, Victoria 3086, Australia.

Division of Chemistry and Structural Biology, Institute for Molecular Bioscience, The University of Queensland, Brisbane, Queensland 4072, Australia.

出版信息

Nat Commun. 2015 Dec 18;6:10199. doi: 10.1038/ncomms10199.

DOI:10.1038/ncomms10199
PMID:26680698
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4703859/
Abstract

Cyclotides are diverse plant backbone cyclized peptides that have attracted interest as pharmaceutical scaffolds, but fundamentals of their biosynthetic origin remain elusive. Backbone cyclization is a key enzyme-mediated step of cyclotide biosynthesis and confers a measure of stability on the resultant cyclotide. Furthermore, cyclization would be desirable for engineered peptides. Here we report the identification of four asparaginyl endopeptidases (AEPs), proteases implicated in cyclization, from the cyclotide-producing plant Oldenlandia affinis. We recombinantly express OaAEP1b and find it functions preferably as a cyclase by coupling C-terminal cleavage of propeptide substrates with backbone cyclization. Interestingly, OaAEP1b cannot cleave at the N-terminal site of O. affinis cyclotide precursors, implicating additional proteases in cyclotide biosynthesis. Finally, we demonstrate the broad utility of this enzyme by cyclization of peptides unrelated to cyclotides. We propose that recombinant OaAEP1b is a powerful tool for use in peptide engineering applications where increased stability of peptide products is desired.

摘要

环肽是多种多样的植物骨架环化肽,作为药物支架已引起人们的关注,但其生物合成起源的基本原理仍然难以捉摸。骨架环化是环肽生物合成中关键的酶介导步骤,并赋予所得环肽一定程度的稳定性。此外,环化对于工程肽来说也是可取的。在此,我们报告了从产环肽的植物近缘老鹳草中鉴定出四种天冬酰胺基内肽酶(AEPs),这些蛋白酶与环化有关。我们重组表达了OaAEP1b,发现它通过将前体肽底物的C端切割与骨架环化偶联,优先作为环化酶发挥作用。有趣的是,OaAEP1b不能在近缘老鹳草环肽前体的N端位点切割,这表明环肽生物合成中还涉及其他蛋白酶。最后,我们通过与环肽无关的肽的环化证明了这种酶的广泛用途。我们提出,重组OaAEP1b是一种强大的工具,可用于需要提高肽产品稳定性的肽工程应用中。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ce16/4703859/a9a533e26f06/ncomms10199-f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ce16/4703859/ce7acc8ef1bd/ncomms10199-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ce16/4703859/8cd3f5b4d986/ncomms10199-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ce16/4703859/dd966d56e7d8/ncomms10199-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ce16/4703859/b18ba46b899e/ncomms10199-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ce16/4703859/d55a44e66c26/ncomms10199-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ce16/4703859/a9a533e26f06/ncomms10199-f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ce16/4703859/ce7acc8ef1bd/ncomms10199-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ce16/4703859/8cd3f5b4d986/ncomms10199-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ce16/4703859/dd966d56e7d8/ncomms10199-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ce16/4703859/b18ba46b899e/ncomms10199-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ce16/4703859/d55a44e66c26/ncomms10199-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ce16/4703859/a9a533e26f06/ncomms10199-f6.jpg

相似文献

1
Efficient backbone cyclization of linear peptides by a recombinant asparaginyl endopeptidase.利用重组天冬酰胺内肽酶实现线性肽的高效主链环化。
Nat Commun. 2015 Dec 18;6:10199. doi: 10.1038/ncomms10199.
2
In Vitro and In Planta Cyclization of Target Peptides Using an Asparaginyl Endopeptidase from Oldenlandia affinis.利用鸡眼草天冬酰胺内肽酶对靶肽进行体外和植物体内环化
Methods Mol Biol. 2019;2012:211-235. doi: 10.1007/978-1-4939-9546-2_12.
3
Circular Permutation of the Native Enzyme-Mediated Cyclization Position in Cyclotides.环肽中环酶介导的环化位置的环状排列。
ACS Chem Biol. 2020 Apr 17;15(4):962-969. doi: 10.1021/acschembio.9b00996. Epub 2020 Mar 30.
4
Co-expression of a cyclizing asparaginyl endopeptidase enables efficient production of cyclic peptides in planta.在植物体内共表达一个环化天冬酰胺内肽酶可有效生产环肽。
J Exp Bot. 2018 Jan 23;69(3):633-641. doi: 10.1093/jxb/erx422.
5
A bifunctional asparaginyl endopeptidase efficiently catalyzes both cleavage and cyclization of cyclic trypsin inhibitors.一种双功能天冬酰胺内肽酶能有效地催化环状胰蛋白酶抑制剂的切割和环化反应。
Nat Commun. 2020 Mar 27;11(1):1575. doi: 10.1038/s41467-020-15418-2.
6
Yeast-based bioproduction of disulfide-rich peptides and their cyclization via asparaginyl endopeptidases.酵母基体制备富含二硫键的肽及其通过天冬酰胺内肽酶的环化。
Nat Protoc. 2021 Mar;16(3):1740-1760. doi: 10.1038/s41596-020-00483-0. Epub 2021 Feb 17.
7
Segmental isotopic labeling of a single-domain globular protein without any refolding step by an asparaginyl endopeptidase.通过天冬酰胺内肽酶对单结构域球状蛋白进行片段同位素标记,无需任何重折叠步骤。
FEBS Lett. 2017 May;591(9):1285-1294. doi: 10.1002/1873-3468.12640. Epub 2017 Apr 20.
8
A suite of kinetically superior AEP ligases can cyclise an intrinsically disordered protein.一套动力学优势的 AEP 连接酶可以环化一个固有无序的蛋白质。
Sci Rep. 2019 Jul 25;9(1):10820. doi: 10.1038/s41598-019-47273-7.
9
Subcellular targeting and biosynthesis of cyclotides in plant cells.植物细胞中环肽的亚细胞靶向和生物合成。
Am J Bot. 2011 Dec;98(12):2018-26. doi: 10.3732/ajb.1100382. Epub 2011 Nov 11.
10
Production of a structurally validated cyclotide in rice suspension cells is enabled by a supporting biosynthetic enzyme.在水稻悬浮细胞中生产结构验证的环肽可通过支持生物合成的酶来实现。
Planta. 2020 Nov 5;252(6):97. doi: 10.1007/s00425-020-03505-z.

引用本文的文献

1
Identification of Ginsentide-like Peptides from Beans with Oxidative Stress Protection.从具有氧化应激保护作用的豆类中鉴定人参肽样肽。
ACS Omega. 2025 Jul 15;10(29):31480-31491. doi: 10.1021/acsomega.5c01401. eCollection 2025 Jul 29.
2
Peptide and Protein Cyclization by a Promiscuous Graspetide Synthetase.通过一种混杂的草肽合成酶实现肽和蛋白质环化
ACS Cent Sci. 2025 Jun 9;11(7):1111-1121. doi: 10.1021/acscentsci.5c00408. eCollection 2025 Jul 23.
3
Modular DNA barcoding of nanobodies enables multiplexed in situ protein imaging and high-throughput biomolecule detection.

本文引用的文献

1
Peptide macrocyclization by a bifunctional endoprotease.通过双功能内切蛋白酶进行肽的大环化。
Chem Biol. 2015 May 21;22(5):571-82. doi: 10.1016/j.chembiol.2015.04.010. Epub 2015 May 7.
2
Structure and mechanism of an aspartimide-dependent peptide ligase in human legumain.人组织蛋白酶 L 中依赖天冬酰胺酰基的肽连接酶的结构与机制
Angew Chem Int Ed Engl. 2015 Mar 2;54(10):2917-21. doi: 10.1002/anie.201409135. Epub 2015 Jan 28.
3
Peptide macrocyclization catalyzed by a prolyl oligopeptidase involved in α-amanitin biosynthesis.
纳米抗体的模块化DNA条形码技术可实现多重原位蛋白质成像和高通量生物分子检测。
Elife. 2025 Jul 22;14:RP105225. doi: 10.7554/eLife.105225.
4
Asparaginyl Ligases with Engineered Substrate Specificity for Controlled, Sequential Transpeptidation Reactions.具有工程化底物特异性的天冬酰胺连接酶,用于可控的顺序转肽反应。
J Am Chem Soc. 2025 Jun 25;147(25):21824-21831. doi: 10.1021/jacs.5c04693. Epub 2025 Jun 11.
5
Exploring Use of a Protein Cage System for Producing Bioactive Peptides in Escherichia coli.探索利用蛋白质笼系统在大肠杆菌中生产生物活性肽。
Microb Biotechnol. 2025 Jun;18(6):e70158. doi: 10.1111/1751-7915.70158.
6
Identification of a key peptide cyclase for novel cyclic peptide discovery in Pseudostellaria heterophylla.太子参中用于发现新型环肽的关键肽环化酶的鉴定
Plant Commun. 2025 May 12;6(5):101315. doi: 10.1016/j.xplc.2025.101315. Epub 2025 Mar 13.
7
Transgenic Innovation: Harnessing Cyclotides as Next Generation Pesticides.转基因创新:利用环肽作为下一代杀虫剂。
ACS Omega. 2025 Feb 17;10(7):6323-6336. doi: 10.1021/acsomega.4c09668. eCollection 2025 Feb 25.
8
Protein ligation for the assembly and study of nonribosomal peptide synthetase megaenzymes.用于非核糖体肽合成酶巨型酶组装和研究的蛋白质连接。
RSC Chem Biol. 2025 Feb 7;6(4):590-603. doi: 10.1039/d4cb00306c. eCollection 2025 Apr 2.
9
Small and Versatile Cyclotides as Anti-infective Agents.小型多功能环肽作为抗感染剂
ACS Infect Dis. 2025 Feb 14;11(2):386-397. doi: 10.1021/acsinfecdis.4c00957. Epub 2025 Jan 22.
10
Structural Basis of High-Precision Protein Ligation and Its Application.高精度蛋白质连接的结构基础及其应用
J Am Chem Soc. 2025 Jan 15;147(2):1604-1611. doi: 10.1021/jacs.4c10689. Epub 2025 Jan 2.
脯氨酰寡肽酶催化的肽大环化参与α-鹅膏蕈碱生物合成。
Chem Biol. 2014 Dec 18;21(12):1610-7. doi: 10.1016/j.chembiol.2014.10.015. Epub 2014 Dec 4.
4
Backbone cyclization of a recombinant cystine-knot peptide by engineered Sortase A.通过工程化的 Sortase A 对重组胱氨酸环肽进行骨干环化。
FEBS Lett. 2014 Nov 28;588(23):4487-96. doi: 10.1016/j.febslet.2014.10.020.
5
Butelase 1 is an Asx-specific ligase enabling peptide macrocyclization and synthesis.Butelase 1 是一种 Asx 特异性连接酶,能够实现肽的大环化和合成。
Nat Chem Biol. 2014 Sep;10(9):732-8. doi: 10.1038/nchembio.1586. Epub 2014 Jul 20.
6
Cyclotides as grafting frameworks for protein engineering and drug design applications.环肽作为蛋白质工程和药物设计应用的嫁接框架。
Biopolymers. 2013 Sep;100(5):480-91. doi: 10.1002/bip.22284.
7
Mechanistic and structural studies on legumain explain its zymogenicity, distinct activation pathways, and regulation.关于组织蛋白酶 L 的机制和结构研究解释了其酶原性、独特的激活途径和调控。
Proc Natl Acad Sci U S A. 2013 Jul 2;110(27):10940-5. doi: 10.1073/pnas.1300686110. Epub 2013 Jun 17.
8
The two-step biosynthesis of cyclic peptides from linear precursors in a member of the plant family Caryophyllaceae involves cyclization by a serine protease-like enzyme.植物石竹科成员中环肽从线性前体的两步生物合成涉及丝氨酸蛋白酶样酶的环化。
J Biol Chem. 2013 May 3;288(18):12500-10. doi: 10.1074/jbc.M112.437947. Epub 2013 Mar 13.
9
Cyclization of the antimicrobial peptide gomesin with native chemical ligation: influences on stability and bioactivity.使用天然化学连接环化抗菌肽 gomesin:对稳定性和生物活性的影响。
Chembiochem. 2013 Mar 18;14(5):617-24. doi: 10.1002/cbic.201300034. Epub 2013 Feb 20.
10
The mechanism of patellamide macrocyclization revealed by the characterization of the PatG macrocyclase domain.通过对 PatG 环化酶结构域的表征揭示了 Patellamide 大环化的机制。
Nat Struct Mol Biol. 2012 Aug;19(8):767-72. doi: 10.1038/nsmb.2340. Epub 2012 Jul 15.