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样本合并及运输条件对用于检测公牛包皮样本中胎儿弯曲杆菌性病亚种的实时聚合酶链反应检测临床敏感性的影响。

Effect of sample pooling and transport conditions on the clinical sensitivity of a real-time polymerase chain reaction assay for Campylobacter fetus subsp. venerealis in preputial samples from bulls.

作者信息

García-Guerra Alvaro, Waldner Cheryl L, Pellegrino Andrea, Macdonald Nicole, Chaban Bonnie, Hill Janet E, Hendrick Steven H

机构信息

Department of Large Animal Clinical Sciences, Western College of Veterinary Medicine, University of Saskatchewan, Saskatoon, Saskatchewan S7N 5B4 (García-Guerra, Waldner, Pellegrino, Macdonald); Department of Veterinary Microbiology, Western College of Veterinary Medicine, University of Saskatchewan, Saskatoon, Saskatchewan S7N 5B4 (Chaban, Hill); Coaldale Veterinary Clinic, Coaldale, Alberta T1M 1M7 (Hendrick).

出版信息

Can J Vet Res. 2016 Jan;80(1):32-9.

Abstract

The diagnosis of bovine genital campylobacteriosis (BGC) presents significant challenges, as traditional methods lack sensitivity when prolonged transport of samples is required. Assays of preputial samples by means of real-time polymerase chain reaction (PCR) provide good sensitivity and high throughput capabilities. However, there is limited information on the acceptable duration of transport and temperature during transport of samples. In addition, the use of pooled samples has proven to be a valuable strategy for the diagnosis of other venereal diseases in cattle. The objectives of the present study were to determine the effect of sample pooling and of transport time and temperature on the clinical sensitivity of a real-time quantitative PCR (qPCR) assay for Campylobacter fetus subsp. venerealis in preputial samples from beef bulls. Eight infected bulls and 176 virgin yearling bulls were used as the source of samples. The qPCR sensitivity was comparable for unpooled samples and pools of 5 samples, whereas sensitivity was decreased for pools of 10 samples. Sensitivity for the various pool sizes improved with repeated sampling. For shorter-term transport (2 and 48 h), sensitivity was greatest when the samples were stored at 4°C and 30°C, whereas for longer-term transport (96 h) sensitivity was greatest when the samples were stored at -20°C. The creation of pools of 5 samples is therefore a good option to decrease costs when screening bulls for BGC with the qPCR assay of direct preputial samples. Ideally the samples should be stored at 4°C and arrive at the laboratory within 48 h of collection, but when that is not possible freezing at -20°C could minimize the loss of sensitivity.

摘要

牛生殖器弯曲杆菌病(BGC)的诊断面临重大挑战,因为在需要长时间运输样本时,传统方法缺乏敏感性。通过实时聚合酶链反应(PCR)检测包皮样本具有良好的敏感性和高通量能力。然而,关于样本运输的可接受时长及运输过程中的温度,相关信息有限。此外,已证明使用混合样本是诊断牛其他性病的一种有效策略。本研究的目的是确定样本混合以及运输时间和温度对用于检测胎儿弯曲杆菌亚种性病亚种的实时定量PCR(qPCR)检测临床敏感性的影响,该检测针对肉牛公牛的包皮样本。使用8头感染公牛和176头未交配周岁公牛作为样本来源。对于未混合样本和5个样本的混合样本,qPCR敏感性相当,而10个样本的混合样本敏感性降低。不同混合样本量的敏感性随着重复采样而提高。对于短期运输(2小时和48小时),样本在4°C和30°C储存时敏感性最高,而对于长期运输(96小时),样本在-20°C储存时敏感性最高。因此,当使用直接包皮样本的qPCR检测法对公牛进行BGC筛查时,创建5个样本的混合样本是降低成本的一个好选择。理想情况下,样本应在4°C储存,并在采集后48小时内送达实验室,但如果无法做到,在-20°C冷冻可将敏感性损失降至最低。

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