CIISA - Centro de Investigação Interdisciplinar em Sanidade Animal, Faculdade de Medicina Veterinária, Universidade de Lisboa, Avenida da Universidade Técnica, 1300-477, Lisbon, Portugal.
BMC Vet Res. 2020 Oct 29;16(1):410. doi: 10.1186/s12917-020-02634-7.
Campylobacter fetus subsp. venerealis (Cfv) is the pathogen responsible for Bovine Genital Campylobacteriosis (BGC), a venereal disease of cattle associated with impaired reproductive performance. Although several PCR assays were developed to identify this pathogen, most of them are still poorly evaluated in clinical samples. This study evaluated real-time PCR assays for Cfv detection in preputial samples of bulls (n = 308).
The detection at the subspecies level (Cfv) compared four assays: two targeting ISCfe1 and two targeting parA gene. The detection at the species level (C. fetus) considered an assay targeting the nahE gene and a commercial kit for C. fetus identification. At the subspecies level, assays directed either to different targets (parA and ISCfe1), or to the same target (ISCfe1 or parA), showed a high percentage of disagreeing results. All samples positive at the subspecies level (n = 169) were negative in C. fetus detection assays, which strongly suggests the horizontal gene transfer of ISCfe1 and parA to other bacterial species. This was confirmed by microbiological isolation of three Campylobacter portucalensis strains responsible for false positive results. Sequences with a high level of identity with ISCfe1 and parA gene of Cfv were identified in C. portucalensis genome.
Overall, this study reveals that PCR assays solely directed to a subspecies target originate a high rate of false positive results, due to the presence of parA and ISCfe1 homologous sequences in other bacterial species, namely of the genus Campylobacter. Although the specificity of these methods may be higher if applied to bulls from herds with clinical features of BGC or in other geographical regions, current PCR diagnosis should couple subspecies and species targets, and further research must be envisaged to identify Cfv specific molecular targets.
弯曲杆菌胎儿亚种。(Cfv)是引起牛生殖道弯曲杆菌病(BGC)的病原体,BGC 是一种与生殖性能受损相关的牛性病。尽管已经开发了几种 PCR 检测方法来鉴定这种病原体,但大多数方法在临床样本中的评估仍不完善。本研究评估了实时 PCR 检测方法在公牛包皮样本中检测 Cfv(n=308)的应用。
在亚种水平(Cfv)的检测中,比较了四种检测方法:两种靶向 ISCfe1,两种靶向 parA 基因。在种水平(C. fetus)的检测中,考虑了一种靶向 nahE 基因的检测方法和一种用于鉴定 C. fetus 的商业试剂盒。在亚种水平上,针对不同靶标(parA 和 ISCfe1)或同一靶标(ISCfe1 或 parA)的检测方法,结果显示出较高的不一致率。在亚种水平上检测为阳性的所有样本(n=169)均在 C. fetus 检测方法中呈阴性,这强烈表明 ISCfe1 和 parA 基因的水平基因转移到了其他细菌物种。这通过对三种导致假阳性结果的弯曲杆菌。portucalensis 菌株的微生物分离得到证实。在弯曲杆菌。portucalensis 基因组中鉴定出与 Cfv 的 ISCfe1 和 parA 基因具有高度同源性的序列。
总的来说,本研究表明,仅针对亚种目标的 PCR 检测方法会导致较高的假阳性结果率,这是由于其他细菌物种(即弯曲杆菌属)中存在 parA 和 ISCfe1 同源序列。尽管这些方法的特异性可能更高,如果应用于具有 BGC 临床特征或在其他地理区域的牛群中的公牛,但当前的 PCR 诊断应结合亚种和种目标,并且必须设想进一步的研究来鉴定 Cfv 特异性分子目标。