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单核苷酸多态性标记作为解决复杂亲属关系案例的附加信息。

SNP Markers as Additional Information to Resolve Complex Kinship Cases.

作者信息

Pontes M Lurdes, Fondevila Manuel, Laréu Maria Victoria, Medeiros Rui

机构信息

Laboratório de Genética e Biologia Forenses, National Institute of Legal Medicine and Forensic Sciences, North Delegation, Porto, Portugal; CENCIFOR- Forensic Science Center, Porto, Portugal.

Instituto de Ciencias Forenses, Universidade de Santiago de Compostela, Santiago de Compostela, Spain.

出版信息

Transfus Med Hemother. 2015 Nov;42(6):385-8. doi: 10.1159/000440832. Epub 2015 Nov 4.

DOI:10.1159/000440832
PMID:26733770
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4698646/
Abstract

BACKGROUND

DNA profiling with sets of highly polymorphic autosomal short tandem repeat (STR) markers has been applied in various aspects of human identification in forensic casework for nearly 20 years. However, in some cases of complex kinship investigation, the information provided by the conventionally used STR markers is not enough, often resulting in low likelihood ratio (LR) calculations. In these cases, it becomes necessary to increment the number of loci under analysis to reach adequate LRs. Recently, it has been proposed that single nucleotide polymorphisms (SNPs) could be used as a supportive tool to STR typing, eventually even replacing the methods/markers now employed.

METHODS

In this work, we describe the results obtained in 7 revised complex paternity cases when applying a battery of STRs, as well as 52 human identification SNPs (SNPforID 52plex identification panel) using a SNaPshot methodology followed by capillary electrophoresis.

RESULTS

Our results show that the analysis of SNPs, as complement to STR typing in forensic casework applications, would at least increase by a factor of 4 total PI values and correspondent Essen-Möller's W value.

CONCLUSIONS

We demonstrated that SNP genotyping could be a key complement to STR information in challenging casework of disputed paternity, such as close relative individualization or complex pedigrees subject to endogamous relations.

摘要

背景

使用高度多态性的常染色体短串联重复序列(STR)标记进行DNA分型已在法医案件工作中的人类身份鉴定的各个方面应用了近20年。然而,在一些复杂亲缘关系调查的案例中,传统使用的STR标记所提供的信息并不足够,常常导致似然比(LR)计算值较低。在这些情况下,有必要增加分析的基因座数量以获得足够的似然比。最近,有人提出单核苷酸多态性(SNP)可作为STR分型的辅助工具,甚至最终取代目前使用的方法/标记。

方法

在这项工作中,我们描述了对7个经修订的复杂亲子鉴定案例应用一系列STR以及52个用于人类身份鉴定的SNP(SNPforID 52plex鉴定试剂盒),采用SNaPshot方法并随后进行毛细管电泳所获得的结果。

结果

我们的结果表明,在法医案件工作应用中,将SNP分析作为STR分型的补充,至少会使累积父权指数(PI)值和相应的埃森-默勒氏W值增加4倍。

结论

我们证明,在有争议的亲子鉴定的具有挑战性的案件工作中,如近亲个体识别或受近亲结婚关系影响的复杂谱系,SNP基因分型可能是STR信息的关键补充。

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本文引用的文献

1
STRs vs. SNPs: thoughts on the future of forensic DNA testing.短串联重复序列(STRs)与单核苷酸多态性(SNPs):关于法医DNA检测未来的思考
Forensic Sci Med Pathol. 2007 Sep;3(3):200-5. doi: 10.1007/s12024-007-0018-1. Epub 2007 Sep 12.
2
Usefulness of SNPs as Supplementary Markers in a Paternity Case with 3 Genetic Incompatibilities at Autosomal and Y Chromosomal Loci.常染色体和 Y 染色体 3 个遗传不相容位点的亲子鉴定案例中 SNP 作为补充标记的有用性。
Transfus Med Hemother. 2014 Apr;41(2):117-21. doi: 10.1159/000357989. Epub 2014 Feb 13.
3
Autosomal SNPs study of a population sample from north of Portugal and a sample of immigrants from the Eastern Europe living in Portugal.
Leg Med (Tokyo). 2014 Mar;16(2):118-20. doi: 10.1016/j.legalmed.2013.12.002. Epub 2013 Dec 12.
4
Forensic genetic SNP typing of low-template DNA and highly degraded DNA from crime case samples.法医遗传 SNP 分型技术在犯罪案件样本低模板 DNA 和高度降解 DNA 中的应用。
Forensic Sci Int Genet. 2013 May;7(3):345-52. doi: 10.1016/j.fsigen.2013.02.004. Epub 2013 Mar 19.
5
Kinship Analysis with Diallelic SNPs - Experiences with the SNPforID Multiplex in an ISO17025 Accreditated Laboratory.双等位基因单核苷酸多态性的亲缘关系分析——在一家获得ISO17025认可的实验室中使用SNPforID多重检测法的经验
Transfus Med Hemother. 2012 Jun;39(3):195-201. doi: 10.1159/000338957. Epub 2012 May 12.
6
Improving human forensics through advances in genetics, genomics and molecular biology.通过遗传学、基因组学和分子生物学的进步来改善人类法医学。
Nat Rev Genet. 2011 Mar;12(3):179-92. doi: 10.1038/nrg2952.
7
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8
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9
Evaluation of the Genplex SNP typing system and a 49plex forensic marker panel.Genplex单核苷酸多态性分型系统及49重法医标记物组合的评估。
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10
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Electrophoresis. 2006 May;27(9):1713-24. doi: 10.1002/elps.200500671.