• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

单神经元转录组分析揭示的内容不止于细胞类型分类:每个神经元都是独一无二的,这重要吗?

Single neuron transcriptome analysis can reveal more than cell type classification: Does it matter if every neuron is unique?

作者信息

Harbom Lise J, Chronister William D, McConnell Michael J

机构信息

Department of Biochemistry and Molecular Genetics, University of Virginia School of Medicine, Charlottesville, Virginia.

Neurosciences Graduate Program, University of Virginia School of Medicine, Charlottesville, Virginia.

出版信息

Bioessays. 2016 Feb;38(2):157-61. doi: 10.1002/bies.201500097. Epub 2016 Jan 8.

DOI:10.1002/bies.201500097
PMID:26749010
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4852373/
Abstract

A recent single cell mRNA sequencing study by Dueck et al. compares neuronal transcriptomes to the transcriptomes of adipocytes and cardiomyocytes. Single cell omic approaches such as those used by the authors are at the leading edge of molecular and biophysical measurement. Many groups are currently employing single cell sequencing approaches to understand cellular heterogeneity in cancer and during normal development. These single cell approaches also are beginning to address long-standing questions regarding nervous system diversity. Beyond an innate interest in cataloging cell type diversity in the brain, single cell neuronal diversity has important implications for neurotypic neural circuit function and for neurological disease. Herein, we review the authors' methods and findings, which most notably include evidence of unique expression profiles in some single neurons.

摘要

最近,杜克等人进行的一项单细胞mRNA测序研究将神经元转录组与脂肪细胞和心肌细胞的转录组进行了比较。作者所采用的诸如单细胞组学方法处于分子和生物物理测量的前沿。目前,许多研究小组正在采用单细胞测序方法来了解癌症和正常发育过程中的细胞异质性。这些单细胞方法也开始解决有关神经系统多样性的长期问题。除了对大脑中细胞类型多样性进行编目有着内在兴趣之外,单细胞神经元多样性对神经典型神经回路功能和神经疾病也具有重要意义。在此,我们回顾作者的方法和研究结果,其中最显著的包括一些单个神经元中独特表达谱的证据。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9de3/5064619/a9588042c8c2/BIES-38-157-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9de3/5064619/a9588042c8c2/BIES-38-157-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9de3/5064619/a9588042c8c2/BIES-38-157-g002.jpg

相似文献

1
Single neuron transcriptome analysis can reveal more than cell type classification: Does it matter if every neuron is unique?单神经元转录组分析揭示的内容不止于细胞类型分类:每个神经元都是独一无二的,这重要吗?
Bioessays. 2016 Feb;38(2):157-61. doi: 10.1002/bies.201500097. Epub 2016 Jan 8.
2
Revealing cellular and molecular complexity of the central nervous system using single cell sequencing.利用单细胞测序揭示中枢神经系统的细胞和分子复杂性。
Stem Cell Res Ther. 2018 Sep 13;9(1):234. doi: 10.1186/s13287-018-0985-z.
3
Classifying Drosophila Olfactory Projection Neuron Subtypes by Single-Cell RNA Sequencing.通过单细胞RNA测序对果蝇嗅觉投射神经元亚型进行分类
Cell. 2017 Nov 16;171(5):1206-1220.e22. doi: 10.1016/j.cell.2017.10.019.
4
Neuronal subtypes and diversity revealed by single-nucleus RNA sequencing of the human brain.人类大脑单细胞 RNA 测序揭示的神经元亚型和多样性。
Science. 2016 Jun 24;352(6293):1586-90. doi: 10.1126/science.aaf1204.
5
Resolving rates of mutation in the brain using single-neuron genomics.利用单神经元基因组学解析大脑中的突变率
Elife. 2016 Feb 22;5:e12966. doi: 10.7554/eLife.12966.
6
Single-cell analysis of diversity in human stem cell-derived neurons.人类干细胞源性神经元多样性的单细胞分析。
Cell Tissue Res. 2018 Jan;371(1):171-179. doi: 10.1007/s00441-017-2728-3. Epub 2017 Nov 29.
7
Gene Expression Analysis by Multiplex Single-Cell RT-PCR.通过多重单细胞逆转录聚合酶链反应进行基因表达分析。
Methods Mol Biol. 2019;1941:139-154. doi: 10.1007/978-1-4939-9077-1_10.
8
Disentangling neural cell diversity using single-cell transcriptomics.利用单细胞转录组学解析神经细胞多样性。
Nat Neurosci. 2016 Aug 26;19(9):1131-41. doi: 10.1038/nn.4366.
9
GnRH neuron type-specific transcriptome analysis by laser captured single-cell microarray in the medaka.利用激光捕获单细胞微阵列分析斑马鱼 GnRH 神经元类型特异性转录组。
Biochem Biophys Res Commun. 2013 Jun 14;435(4):562-6. doi: 10.1016/j.bbrc.2013.05.004. Epub 2013 May 11.
10
A comparative strategy for single-nucleus and single-cell transcriptomes confirms accuracy in predicted cell-type expression from nuclear RNA.一种单细胞和单核转录组的比较策略证实了核 RNA 预测细胞类型表达的准确性。
Sci Rep. 2017 Jul 20;7(1):6031. doi: 10.1038/s41598-017-04426-w.

引用本文的文献

1
Postzygotic Somatic Mutations in the Human Brain Expand the Threshold-Liability Model of Schizophrenia.人类大脑中的合子后体细胞突变扩展了精神分裂症的阈值易感性模型。
Front Psychiatry. 2020 Oct 22;11:587162. doi: 10.3389/fpsyt.2020.587162. eCollection 2020.
2
Molecular expression profiles of morphologically defined hippocampal neuron types: Empirical evidence and relational inferences.形态定义的海马神经元类型的分子表达谱:经验证据和关系推断。
Hippocampus. 2020 May;30(5):472-487. doi: 10.1002/hipo.23165. Epub 2019 Oct 9.
3
Gene regulatory mechanisms underlying sex differences in brain development and psychiatric disease.

本文引用的文献

1
Olfactory sensory neurons transiently express multiple olfactory receptors during development.嗅觉感觉神经元在发育过程中短暂地表达多种嗅觉受体。
Mol Syst Biol. 2015 Dec 8;11(12):844. doi: 10.15252/msb.20156639.
2
Variation is function: Are single cell differences functionally important?: Testing the hypothesis that single cell variation is required for aggregate function.变异即功能:单细胞差异在功能上重要吗?:检验关于集合功能需要单细胞变异这一假设。
Bioessays. 2016 Feb;38(2):172-80. doi: 10.1002/bies.201500124. Epub 2015 Dec 2.
3
Design and Analysis of Single-Cell Sequencing Experiments.
脑发育和精神疾病中性别差异的基因调控机制。
Ann N Y Acad Sci. 2018 May;1420(1):26-45. doi: 10.1111/nyas.13564. Epub 2018 Jan 24.
4
The predictive nature of transcript expression levels on protein expression in adult human brain.成人人类大脑中转录本表达水平对蛋白质表达的预测性质。
BMC Genomics. 2017 Apr 24;18(1):322. doi: 10.1186/s12864-017-3674-x.
5
Increased neuronal death and disturbed axonal growth in the Polμ-deficient mouse embryonic retina.在Polμ基因缺陷的小鼠胚胎视网膜中,神经元死亡增加且轴突生长受到干扰。
Sci Rep. 2016 May 13;6:25928. doi: 10.1038/srep25928.
单细胞测序实验的设计与分析。
Cell. 2015 Nov 5;163(4):799-810. doi: 10.1016/j.cell.2015.10.039.
4
Single-cell transcriptomics reveals receptor transformations during olfactory neurogenesis.单细胞转录组学揭示嗅觉神经发生过程中的受体转变。
Science. 2015 Dec 4;350(6265):1251-5. doi: 10.1126/science.aad2456. Epub 2015 Nov 5.
5
Somatic mutation in single human neurons tracks developmental and transcriptional history.单个人类神经元中的体细胞突变追踪发育和转录历史。
Science. 2015 Oct 2;350(6256):94-98. doi: 10.1126/science.aab1785.
6
Epigenomic Signatures of Neuronal Diversity in the Mammalian Brain.哺乳动物大脑中神经元多样性的表观基因组特征
Neuron. 2015 Jun 17;86(6):1369-84. doi: 10.1016/j.neuron.2015.05.018.
7
Deep sequencing reveals cell-type-specific patterns of single-cell transcriptome variation.深度测序揭示了单细胞转录组变异的细胞类型特异性模式。
Genome Biol. 2015 Jun 9;16(1):122. doi: 10.1186/s13059-015-0683-4.
8
Activity-Induced DNA Breaks Govern the Expression of Neuronal Early-Response Genes.活动诱导的DNA断裂调控神经元早期反应基因的表达。
Cell. 2015 Jun 18;161(7):1592-605. doi: 10.1016/j.cell.2015.05.032. Epub 2015 Jun 4.
9
Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets.利用纳升液滴对单个细胞进行高度并行的全基因组表达谱分析。
Cell. 2015 May 21;161(5):1202-1214. doi: 10.1016/j.cell.2015.05.002.
10
On the identification of low allele frequency mosaic mutations in the brains of Alzheimer's disease patients.在阿尔茨海默病患者大脑中鉴定低频等位基因频率镶嵌突变。
Alzheimers Dement. 2015 Nov;11(11):1265-76. doi: 10.1016/j.jalz.2015.02.007. Epub 2015 Apr 29.