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metaGraphite-a new layer of pathway annotation to get metabolite networks.
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Pathway Activity Profiling (PAPi): from the metabolite profile to the metabolic pathway activity.
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Sparse network modeling and metscape-based visualization methods for the analysis of large-scale metabolomics data.
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Missing value imputation for LC-MS metabolomics data by incorporating metabolic network and adduct ion relations.
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Lung microbial-host interface through the lens of multi-omics.
Mucosal Immunol. 2022 May;15(5):837-845. doi: 10.1038/s41385-022-00541-8. Epub 2022 Jul 6.
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Current State of Metabolomics Research in Meat Quality Analysis and Authentication.
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New Strategies and Challenges in Lung Proteomics and Metabolomics. An Official American Thoracic Society Workshop Report.
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Systems Medicine as an Emerging Tool for Cardiovascular Genetics.
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Metabolomics and diabetes: analytical and computational approaches.
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Taurine trial in succinic semialdehyde dehydrogenase deficiency and elevated CNS GABA.
Neurology. 2014 Mar 18;82(11):940-4. doi: 10.1212/WNL.0000000000000210. Epub 2014 Feb 12.
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The Reactome pathway knowledgebase.
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The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of Pathway/Genome Databases.
Nucleic Acids Res. 2014 Jan;42(Database issue):D459-71. doi: 10.1093/nar/gkt1103. Epub 2013 Nov 12.
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SMPDB 2.0: big improvements to the Small Molecule Pathway Database.
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GeneSetDB: A comprehensive meta-database, statistical and visualisation framework for gene set analysis.
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A community-driven global reconstruction of human metabolism.
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The role of endoplasmic reticulum stress and the unfolded protein response in fibrosis.
Curr Opin Rheumatol. 2012 Nov;24(6):663-8. doi: 10.1097/BOR.0b013e3283588dbb.
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MetaboAnalyst 2.0--a comprehensive server for metabolomic data analysis.
Nucleic Acids Res. 2012 Jul;40(Web Server issue):W127-33. doi: 10.1093/nar/gks374. Epub 2012 May 2.
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Metab2MeSH: annotating compounds with medical subject headings.
Bioinformatics. 2012 May 15;28(10):1408-10. doi: 10.1093/bioinformatics/bts156. Epub 2012 Apr 6.

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