Ridge Karen M, Shumaker Dale, Robert Amélie, Hookway Caroline, Gelfand Vladimir I, Janmey Paul A, Lowery Jason, Guo Ming, Weitz David A, Kuczmarski Edward, Goldman Robert D
Division of Pulmonary and Critical Care Medicine, Chicago, Illinois, USA; Department of Cell and Molecular Biology, Northwestern University, Feinberg School of Medicine, Chicago, Illinois, USA; Veterans Administration, Chicago, Illinois, USA.
Division of Pulmonary and Critical Care Medicine, Chicago, Illinois, USA; Department of Cell and Molecular Biology, Northwestern University, Feinberg School of Medicine, Chicago, Illinois, USA.
Methods Enzymol. 2016;568:389-426. doi: 10.1016/bs.mie.2015.09.036. Epub 2015 Dec 19.
The type III intermediate filament protein vimentin was once thought to function mainly as a static structural protein in the cytoskeleton of cells of mesenchymal origin. Now, however, vimentin is known to form a dynamic, flexible network that plays an important role in a number of signaling pathways. Here, we describe various methods that have been developed to investigate the cellular functions of the vimentin protein and intermediate filament network, including chemical disruption, photoactivation and photoconversion, biolayer interferometry, soluble bead binding assay, three-dimensional substrate experiments, collagen gel contraction, optical-tweezer active microrheology, and force spectrum microscopy. Using these techniques, the contributions of vimentin to essential cellular processes can be probed in ever further detail.
III型中间丝蛋白波形蛋白曾被认为主要作为间充质来源细胞骨架中的一种静态结构蛋白发挥作用。然而现在,已知波形蛋白会形成一个动态、灵活的网络,在许多信号通路中发挥重要作用。在此,我们描述了为研究波形蛋白和中间丝网络的细胞功能而开发的各种方法,包括化学破坏、光激活和光转换、生物层干涉术、可溶性珠子结合试验、三维底物实验、胶原凝胶收缩、光镊主动微流变学和力谱显微镜。使用这些技术,可以更深入地探究波形蛋白对基本细胞过程的贡献。