Cao Wen-Ming, Gao Yun, Yang Hong-Jian, Xie Shang-Nao, Ding Xiao-Wen, Pan Zhi-Wen, Ye Wei-Wu, Wang Xiao-Jia
Department of Medical Oncology, Zhejiang Cancer Hospital, 38 Guangji Road, Hangzhou, 310022, China.
Institute of Cancer Research, Zhejiang Cancer Hospital, Hangzhou, 310022, China.
BMC Cancer. 2016 Feb 6;16:64. doi: 10.1186/s12885-016-2107-6.
Germline mutations in the BRCA1 and BRCA2 genes greatly increase a woman's risk of developing breast and/or ovarian cancer. The prevalence and distribution of such mutations differ across races/ethnicities. Several studies have investigated Chinese women with high-risk breast cancer, but the full spectrum of the mutations in these two genes remains unclear.
In this study, 133 unrelated Chinese women with familial breast/ovarian cancer living in Zhejiang, eastern China, were enrolled between the years 2008 and 2014. The complete coding regions and exon-intron boundaries of BRCA1 and BRCA2 were screened by PCR-sequencing assay. Haplotype analysis was performed to confirm BRCA1 and BRCA2 founder mutations. In silico predictions were performed to identify the non-synonymous amino acid changes that were likely to disrupt the functions of BRCA1 and BRCA2.
A total of 23 deleterious mutations were detected in the two genes in 31 familial breast/ovarian cancer patients with a total mutation frequency of 23.3% (31/133). The highest frequency of 50.0% (8/16) was found in breast cancer patients with a history of ovarian cancer. The frequencies of BRCA1 and BRCA2 mutations were 13.5 % (18/133) and 9.8% (13/133), respectively. We identified five novel deleterious mutations (c.3295delC, c.3780_3781delAG, c.4063_4066delAATC, c.5161 > T and c.5173insA) in BRCA1 and seven (c.1-40delGA, c.4487delC, c.469_473delAAGTC, c.5495delC, c.6141T > A, c.6359C > G and c.7588C > T) in BRCA2, which accounted for 52.2% (12/23) of the total mutations. Six recurrent mutations were found, including four (c.3780_3781delAG, c.5154G > A, c.5468-1del8 and c.5470_5477del8) in BRCA1 and two (c.3109C > T and c.5682C > G) in BRCA2. Two recurrent BRCA1 mutations (c.5154G > A and c.5468-1del8) were identified as putative founder mutations. We also found 11 unclassified variants, and nine of these are novel. The possibility was that each of the non-synonymous amino acid changes would disrupt the function of BRCA1 and BRCA2 varied according to the different algorithms used.
BRCA1 and BRCA2 mutations accounted for a considerable proportion of hereditary breast/ovarian cancer patients from eastern China and the spectrum of the mutations of these two genes exhibited some unique features. The two BRCA1 putative founder mutations may provide a cost-effective option to screen Chinese population, while founder effects of the two mutations should be investigated in a lager sample size of patients.
BRCA1和BRCA2基因的种系突变极大地增加了女性患乳腺癌和/或卵巢癌的风险。此类突变的患病率和分布在不同种族/民族中有所不同。多项研究对中国高危乳腺癌女性进行了调查,但这两个基因的突变全貌仍不清楚。
在本研究中,2008年至2014年期间纳入了133名居住在中国东部浙江省、无血缘关系的家族性乳腺癌/卵巢癌中国女性。通过聚合酶链反应测序分析筛查BRCA1和BRCA2的完整编码区及外显子-内含子边界。进行单倍型分析以确认BRCA1和BRCA2的始祖突变。通过计算机预测来识别可能破坏BRCA1和BRCA2功能的非同义氨基酸变化。
在31名家族性乳腺癌/卵巢癌患者的这两个基因中总共检测到23个有害突变,总突变频率为23.3%(31/133)。在有卵巢癌病史的乳腺癌患者中发现的最高频率为50.0%(8/16)。BRCA1和BRCA2突变频率分别为13.5%(18/133)和9.8%(13/133)。我们在BRCA1中鉴定出5个新的有害突变(c.3295delC、c.3780_3781delAG、c.4063_4066delAATC、c.5l61>T和c.5173insA),在BRCA2中鉴定出7个(c.1-40delGA、c.4487delC、c.469_473delAAGTC、c.5495delC、c.6141T>A、c.6359C>G和c.7588C>T),这些突变占总突变的52.2%(12/23)。发现了6个复发性突变,包括BRCA1中的4个(c.3780_3781delAG、c.5154G>A、c.5468-1del8和c.5470_5477del8)和BRCA2中的2个(c.3109C>T和c.5682C>G)。两个BRCA1复发性突变(c.5154G>A和c.5468-1del8)被鉴定为假定的始祖突变。我们还发现了11个未分类的变异,其中9个是新的。根据所使用的不同算法,每个非同义氨基酸变化破坏BRCA1和BRCA2功能的可能性各不相同。
BRCA1和BRCA2突变在中国东部遗传性乳腺癌/卵巢癌患者中占相当大的比例,这两个基因的突变谱表现出一些独特特征。这两个BRCA1假定始祖突变可能为筛查中国人群提供一种经济有效的选择,而这两个突变的始祖效应应在更大样本量的患者中进行研究。