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盖辛格MyCode社区健康倡议:一个用于精准医学研究的与电子健康记录相链接的生物样本库。

The Geisinger MyCode community health initiative: an electronic health record-linked biobank for precision medicine research.

作者信息

Carey David J, Fetterolf Samantha N, Davis F Daniel, Faucett William A, Kirchner H Lester, Mirshahi Uyenlinh, Murray Michael F, Smelser Diane T, Gerhard Glenn S, Ledbetter David H

机构信息

Geisinger Health System, Danville, PA, USA.

Current address: Department of Medical Genetics and Molecular Biochemistry, Temple University School of Medicine, Philadelphia, PA, USA.

出版信息

Genet Med. 2016 Sep;18(9):906-13. doi: 10.1038/gim.2015.187. Epub 2016 Feb 11.

Abstract

PURPOSE

Geisinger Health System (GHS) provides an ideal platform for Precision Medicine. Key elements are the integrated health system, stable patient population, and electronic health record (EHR) infrastructure. In 2007, Geisinger launched MyCode, a system-wide biobanking program to link samples and EHR data for broad research use.

METHODS

Patient-centered input into MyCode was obtained using participant focus groups. Participation in MyCode is based on opt-in informed consent and allows recontact, which facilitates collection of data not in the EHR and, since 2013, the return of clinically actionable results to participants. MyCode leverages Geisinger's technology and clinical infrastructure for participant tracking and sample collection.

RESULTS

MyCode has a consent rate of >85%, with more than 90,000 participants currently and with ongoing enrollment of ~4,000 per month. MyCode samples have been used to generate molecular data, including high-density genotype and exome sequence data. Genotype and EHR-derived phenotype data replicate previously reported genetic associations.

CONCLUSION

The MyCode project has created resources that enable a new model for translational research that is faster, more flexible, and more cost-effective than traditional clinical research approaches. The new model is scalable and will increase in value as these resources grow and are adopted across multiple research platforms.Genet Med 18 9, 906-913.

摘要

目的

盖辛格医疗系统(GHS)为精准医学提供了一个理想的平台。关键要素包括综合医疗系统、稳定的患者群体以及电子健康记录(EHR)基础设施。2007年,盖辛格启动了MyCode项目,这是一个全系统范围的生物样本库项目,旨在将样本与EHR数据相链接,以供广泛的研究使用。

方法

通过参与者焦点小组获得以患者为中心的关于MyCode项目的反馈。参与MyCode项目基于选择加入的知情同意,并允许再次联系,这有助于收集EHR中未包含的数据,并且自2013年以来,还能将具有临床可操作结果反馈给参与者。MyCode利用盖辛格的技术和临床基础设施进行参与者追踪和样本采集。

结果

MyCode项目的同意率超过85%,目前有超过90000名参与者,且每月持续招募约4000人。MyCode项目的样本已用于生成分子数据,包括高密度基因型和外显子序列数据。基因型和源自EHR的表型数据重复了先前报道的基因关联。

结论

MyCode项目创建了资源,从而形成了一种新的转化研究模式,该模式比传统临床研究方法更快、更灵活且更具成本效益。这种新模式具有可扩展性,并且随着这些资源的增长以及在多个研究平台上的应用,其价值将会增加。《基因医学》第18卷第9期,906 - 913页。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/382a/4981567/62f75985de7c/nihms738220f1.jpg

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