• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

单个残基取代导致了人胞质肌酸激酶两种同工型之间热稳定性的显著差异。

A single residue substitution accounts for the significant difference in thermostability between two isoforms of human cytosolic creatine kinase.

作者信息

Liu Huihui, Gao Yan-Song, Chen Xiang-Jun, Chen Zhe, Zhou Hai-Meng, Yan Yong-Bin, Gong Haipeng

机构信息

MOE Key Laboratory of Bioinformatics, School of Life Sciences, Tsinghua University, Beijing 100084, China.

State Key Laboratory of Membrane Biology, School of Life Sciences, Tsinghua University, Beijing 100084, China.

出版信息

Sci Rep. 2016 Feb 16;6:21191. doi: 10.1038/srep21191.

DOI:10.1038/srep21191
PMID:26879258
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4754747/
Abstract

Creatine kinase (CK) helps maintain homeostasis of intracellular ATP level by catalyzing the reversible phosphotransfer between ATP and phosphocreatine. In humans, there are two cytosolic CK isoforms, the muscle-type (M) and the brain-type (B), which frequently function as homodimers (hMMCK and hBBCK). Interestingly, these isoenzymes exhibit significantly different thermostabilities, despite high similarity in amino acid sequences and tertiary structures. In order to investigate the mechanism of this phenomenon, in this work, we first used domain swapping and site-directed mutagenesis to search for the key residues responsible for the isoenzyme-specific thermostability. Strikingly, the difference in thermostability was found to principally arise from one single residue substitution at position 36 (Pro in hBBCK vs. Leu in hMMCK). We then engaged the molecular dynamics simulations to study the molecular mechanism. The calculations imply that the P36L substitution introduces additional local interactions around residue 36 and thus further stabilizes the dimer interface through a complex interaction network, which rationalizes the observation that hMMCK is more resistant to thermal inactivation than hBBCK. We finally confirmed this molecular explanation through thermal inactivation assays on Asp36 mutants that were proposed to devastate the local interactions and thus the dimer associations in both isoenzymes.

摘要

肌酸激酶(CK)通过催化ATP与磷酸肌酸之间的可逆磷酸转移反应,帮助维持细胞内ATP水平的稳态。在人类中,有两种胞质CK同工酶,即肌肉型(M)和脑型(B),它们通常以同二聚体形式发挥作用(hMMCK和hBBCK)。有趣的是,尽管这些同工酶在氨基酸序列和三级结构上高度相似,但它们的热稳定性却存在显著差异。为了探究这种现象的机制,在本研究中,我们首先利用结构域交换和定点诱变来寻找决定同工酶特异性热稳定性的关键残基。令人惊讶的是,发现热稳定性的差异主要源于36位的单个残基取代(hBBCK中的Pro与hMMCK中的Leu)。然后,我们通过分子动力学模拟来研究其分子机制。计算结果表明,P36L取代在36位残基周围引入了额外的局部相互作用,从而通过复杂的相互作用网络进一步稳定了二聚体界面,这解释了hMMCK比hBBCK更耐热失活的现象。我们最终通过对Asp36突变体进行热失活实验证实了这一分子解释,该突变体被认为破坏了两种同工酶中的局部相互作用以及二聚体缔合。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2737/4754747/1d898b8aa462/srep21191-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2737/4754747/e6c1035abfcf/srep21191-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2737/4754747/cf4e29200db3/srep21191-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2737/4754747/da785416cd3f/srep21191-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2737/4754747/1d898b8aa462/srep21191-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2737/4754747/e6c1035abfcf/srep21191-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2737/4754747/cf4e29200db3/srep21191-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2737/4754747/da785416cd3f/srep21191-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2737/4754747/1d898b8aa462/srep21191-f4.jpg

相似文献

1
A single residue substitution accounts for the significant difference in thermostability between two isoforms of human cytosolic creatine kinase.单个残基取代导致了人胞质肌酸激酶两种同工型之间热稳定性的显著差异。
Sci Rep. 2016 Feb 16;6:21191. doi: 10.1038/srep21191.
2
Isoenzyme-specific thermostability of human cytosolic creatine kinase.人细胞质肌酸激酶同工酶的酶特异性热稳定性。
Int J Biol Macromol. 2010 Jul 1;47(1):27-32. doi: 10.1016/j.ijbiomac.2010.03.025. Epub 2010 Apr 8.
3
The activity of carp muscle-specific creatine kinase at low temperature is enhanced by decreased hydrophobicity of residue 268.鲤鱼肌肉特异性肌酸激酶在低温下的活性因268位残基疏水性降低而增强。
Physiol Biochem Zool. 2014 Jul-Aug;87(4):507-16. doi: 10.1086/676466. Epub 2014 Jun 3.
4
Sequential events in the irreversible thermal denaturation of human brain-type creatine kinase by spectroscopic methods.通过光谱法研究人脑中肌酸激酶不可逆热变性的连续事件。
Int J Mol Sci. 2010 Jun 25;11(7):2584-96. doi: 10.3390/ijms11072584.
5
Activity and function of rabbit muscle-specific creatine kinase at low temperature by mutation at gly268 to asn268.突变甘氨酸 268 为天冬酰胺 268 对兔肌型肌酸激酶低温下活性和功能的影响。
Comp Biochem Physiol B Biochem Mol Biol. 2011 Mar;158(3):189-98. doi: 10.1016/j.cbpb.2010.11.009. Epub 2010 Dec 3.
6
Cellular compartmentation of energy metabolism: creatine kinase microcompartments and recruitment of B-type creatine kinase to specific subcellular sites.能量代谢的细胞区室化:肌酸激酶微区室以及B型肌酸激酶向特定亚细胞位点的募集。
Amino Acids. 2016 Aug;48(8):1751-74. doi: 10.1007/s00726-016-2267-3. Epub 2016 Jun 18.
7
Effects of the single point genetic mutation D54G on muscle creatine kinase activity, structure and stability.单点基因突变D54G对肌肉肌酸激酶活性、结构及稳定性的影响
Int J Biochem Cell Biol. 2007;39(2):392-401. doi: 10.1016/j.biocel.2006.09.004. Epub 2006 Sep 19.
8
Dissecting the key residues crucial for the species-specific thermostability of muscle-type creatine kinase.解析对肌肉型肌酸激酶种属特异性热稳定性起关键作用的关键残基。
Int J Biol Macromol. 2010 Oct 1;47(3):366-70. doi: 10.1016/j.ijbiomac.2010.06.001. Epub 2010 Jun 15.
9
Role of the linker between the N- and C-terminal domains in the stability and folding of rabbit muscle creatine kinase.N端和C端结构域之间的连接子在兔肌酸激酶稳定性和折叠中的作用
Int J Biochem Cell Biol. 2007;39(10):1816-27. doi: 10.1016/j.biocel.2007.04.028. Epub 2007 May 22.
10
Overexpression, purification, and preliminary X-ray crystallographic analysis of human brain-type creatine kinase.人脑型肌酸激酶的过表达、纯化及初步X射线晶体学分析
J Microbiol Biotechnol. 2008 Feb;18(2):295-8.

引用本文的文献

1
Insights into the mechanism of the PIK3CA E545K activating mutation using MD simulations.利用 MD 模拟深入了解 PIK3CA E545K 激活突变的机制。
Sci Rep. 2018 Oct 19;8(1):15544. doi: 10.1038/s41598-018-27044-6.

本文引用的文献

1
Protein engineering of Bacillus acidopullulyticus pullulanase for enhanced thermostability using in silico data driven rational design methods.利用计算机数据驱动的合理设计方法对嗜酸普鲁兰芽孢杆菌支链淀粉酶进行蛋白质工程改造以提高其热稳定性
Enzyme Microb Technol. 2015 Oct;78:74-83. doi: 10.1016/j.enzmictec.2015.06.013. Epub 2015 Jun 22.
2
Rational stabilization of complex proteins: a divide and combine approach.复杂蛋白质的合理稳定化:一种分解与组合方法。
Sci Rep. 2015 Mar 16;5:9129. doi: 10.1038/srep09129.
3
Robust enzyme design: bioinformatic tools for improved protein stability.
强大的酶设计:用于提高蛋白质稳定性的生物信息学工具
Biotechnol J. 2015 Mar;10(3):344-55. doi: 10.1002/biot.201400150. Epub 2014 Dec 19.
4
Identification of key amino acids for the evolution of promoter target specificity of anthocyanin and proanthocyanidin regulating MYB factors.鉴定调控花青素和原花青素合成的 MYB 因子启动子靶标特异性进化的关键氨基酸。
Plant Mol Biol. 2013 Jul;82(4-5):457-71. doi: 10.1007/s11103-013-0074-8. Epub 2013 May 21.
5
Partial least-squares functional mode analysis: application to the membrane proteins AQP1, Aqy1, and CLC-ec1.偏最小二乘函数模式分析:在水通道蛋白 AQP1、Aqy1 和 CLC-ec1 中的应用。
Biophys J. 2012 Aug 22;103(4):786-96. doi: 10.1016/j.bpj.2012.07.022.
6
Nucleotide-dependent mechanism of Get3 as elucidated from free energy calculations.从自由能计算中阐明 Get3 的核苷酸依赖性机制。
Proc Natl Acad Sci U S A. 2012 May 15;109(20):7759-64. doi: 10.1073/pnas.1117441109. Epub 2012 Apr 30.
7
Accelerated molecular dynamics in computational drug design.计算药物设计中的加速分子动力学
Methods Mol Biol. 2012;819:515-24. doi: 10.1007/978-1-61779-465-0_30.
8
Dissimilarity in the folding of human cytosolic creatine kinase isoenzymes.人细胞质肌酸激酶同工酶折叠的差异。
PLoS One. 2011;6(9):e24681. doi: 10.1371/journal.pone.0024681. Epub 2011 Sep 9.
9
Implementation of Accelerated Molecular Dynamics in NAMD.在 NAMD 中加速分子动力学的实现。
Comput Sci Discov. 2011;4(1). doi: 10.1088/1749-4699/4/1/015002.
10
ProDy: protein dynamics inferred from theory and experiments.ProDy:从理论和实验推断的蛋白质动力学。
Bioinformatics. 2011 Jun 1;27(11):1575-7. doi: 10.1093/bioinformatics/btr168. Epub 2011 Apr 5.