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细菌中细胞大小稳态的加法器与粗粒度方法

Adder and a coarse-grained approach to cell size homeostasis in bacteria.

作者信息

Sauls John T, Li Dongyang, Jun Suckjoon

机构信息

UCSD Physics and Molecular Biology, 9500 Gilman Dr., La Jolla, CA 92093, United States.

UCSD Physics and Molecular Biology, 9500 Gilman Dr., La Jolla, CA 92093, United States.

出版信息

Curr Opin Cell Biol. 2016 Feb;38:38-44. doi: 10.1016/j.ceb.2016.02.004. Epub 2016 Feb 20.

DOI:10.1016/j.ceb.2016.02.004
PMID:26901290
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5660915/
Abstract

Cell size control and homeostasis is a long-standing subject in biology. Recent experimental work provides extensive evidence for a simple, quantitative size homeostasis principle coined adder (as opposed to sizer or timer). The adder principle provides unexpected insights into how bacteria maintain their size without employing a feedback mechanism. We review the genesis of adder and recent cell size homeostasis study on evolutionarily divergent bacterial organisms and beyond. We propose new coarse-grained approaches to understand the underlying mechanisms of cell size control at the whole cell level.

摘要

细胞大小控制与稳态是生物学中一个长期存在的课题。最近的实验工作为一个简单的定量大小稳态原理——加法器原理(与大小控制器或定时器原理相对)提供了大量证据。加法器原理为细菌如何在不采用反馈机制的情况下维持其大小提供了意想不到的见解。我们回顾了加法器原理的起源以及最近对进化上不同的细菌生物及其他生物的细胞大小稳态研究。我们提出了新的粗粒度方法来理解全细胞水平上细胞大小控制的潜在机制。

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Adder and a coarse-grained approach to cell size homeostasis in bacteria.细菌中细胞大小稳态的加法器与粗粒度方法
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本文引用的文献

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Self-Consistent Examination of Donachie's Constant Initiation Size at the Single-Cell Level.单细胞水平下对多纳奇恒定起始大小的自洽检验。
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Inflating bacterial cells by increased protein synthesis.通过增加蛋白质合成使细菌细胞膨胀。
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Chromosome replication, cell growth, division and shape: a personal perspective.染色体复制、细胞生长、分裂与形态:个人观点
细胞大小稳态的一种通用机制:对克隆增殖随机动力学的影响
bioRxiv. 2024 Sep 19:2024.09.13.612972. doi: 10.1101/2024.09.13.612972.
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Mechanisms of cell size regulation in slow-growing Escherichia coli cells: discriminating models beyond the adder.在生长缓慢的大肠杆菌细胞中调节细胞大小的机制:超越加法器的区分模型。
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Balance between asymmetric allocation and repair of somatic damage in unicellular life forms as an ancient form of r/K selection.单细胞生命形式中体细胞损伤的非对称分配和修复之间的平衡是 r/K 选择的古老形式。
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Scaling of stochastic growth and division dynamics: A comparative study of individual rod-shaped cells in the Mother Machine and SChemostat platforms.随机生长和分裂动力学的标度:在 Mother Machine 和 SChemostat 平台上对个体杆状细胞的比较研究。
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Intracellular signaling in proto-eukaryotes evolves to alleviate regulatory conflicts of endosymbiosis.原核生物细胞内信号转导的进化是为了缓解共生关系的调控冲突。
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Unicellular life balances asymmetric allocation and repair of somatic damage representing the origin of r/K selection.单细胞生物平衡体细胞损伤的不对称分配和修复,这代表了r/K选择的起源。
bioRxiv. 2023 Nov 21:2023.11.21.568103. doi: 10.1101/2023.11.21.568103.
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Protein aggregates act as a deterministic disruptor during bacterial cell size homeostasis.蛋白质聚集体在细菌细胞大小动态平衡过程中充当一种确定性的破坏者。
Cell Mol Life Sci. 2023 Nov 16;80(12):360. doi: 10.1007/s00018-023-05002-4.
10
PyEcoLib: a python library for simulating stochastic cell size dynamics.PyEcoLib:一个用于模拟随机细胞大小动态的 Python 库。
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Front Microbiol. 2015 Aug 3;6:756. doi: 10.3389/fmicb.2015.00756. eCollection 2015.
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Cell-Size Homeostasis and the Incremental Rule in a Bacterial Pathogen.一种细菌病原体中的细胞大小稳态与增量规则
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Bacterial Cell Enlargement Requires Control of Cell Wall Stiffness Mediated by Peptidoglycan Hydrolases.细菌细胞的增大需要通过肽聚糖水解酶介导来控制细胞壁的硬度。
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Cell-shape homeostasis in Escherichia coli is driven by growth, division, and nucleoid complexity.大肠杆菌中的细胞形态稳态由生长、分裂和类核复杂性驱动。
Biophys J. 2015 Jul 21;109(2):178-81. doi: 10.1016/j.bpj.2015.06.026.
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Magnetic levitation of single cells.单细胞的磁悬浮
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Size sensors in bacteria, cell cycle control, and size control.细菌中的大小传感器、细胞周期控制与大小控制。
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