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《研究技术简易指南:皮肤研究中的细菌16S核糖体RNA基因测序》

Research Techniques Made Simple: Bacterial 16S Ribosomal RNA Gene Sequencing in Cutaneous Research.

作者信息

Jo Jay-Hyun, Kennedy Elizabeth A, Kong Heidi H

机构信息

Dermatology Branch, Center for Cancer Research, National Cancer Institute, National Institute of Health, Bethesda, Maryland, USA.

Dermatology Branch, Center for Cancer Research, National Cancer Institute, National Institute of Health, Bethesda, Maryland, USA.

出版信息

J Invest Dermatol. 2016 Mar;136(3):e23-e27. doi: 10.1016/j.jid.2016.01.005.

Abstract

Skin serves as a protective barrier and also harbors numerous microorganisms collectively comprising the skin microbiome. As a result of recent advances in sequencing (next-generation sequencing), our understanding of microbial communities on skin has advanced substantially. In particular, the 16S ribosomal RNA gene sequencing technique has played an important role in efforts to identify the global communities of bacteria in healthy individuals and patients with various disorders in multiple topographical regions over the skin surface. Here, we describe basic principles, study design, and a workflow of 16S ribosomal RNA gene sequencing methodology, primarily for investigators who are not familiar with this approach. This article will also discuss some applications and challenges of 16S ribosomal RNA sequencing as well as directions for future development.

摘要

皮肤作为一道保护屏障,还寄居着众多微生物,这些微生物共同构成了皮肤微生物群。由于测序技术(下一代测序)的最新进展,我们对皮肤微生物群落的理解有了显著提高。特别是,16S核糖体RNA基因测序技术在识别健康个体以及患有各种疾病的患者皮肤表面多个地形区域中的全球细菌群落方面发挥了重要作用。在此,我们主要针对不熟悉该方法的研究人员,描述16S核糖体RNA基因测序方法的基本原理、研究设计和工作流程。本文还将讨论16S核糖体RNA测序的一些应用和挑战以及未来的发展方向。

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