Thomas Tina, De Tanwee Das, Sharma Punita, Lata Suman, Saraswat Priyanka, Pandey Kailash C, Dixit Rajnikant
Host-Parasite Interaction Biology Group, National Institute of Malaria Research, Sector-8, Dwarka, Delhi -110077, (India).
Host-Parasite Interaction Biology Group, National Institute of Malaria Research, Sector-8, Dwarka, Delhi -110077, (India).
Gene. 2016 Jul 10;585(2):177-90. doi: 10.1016/j.gene.2016.02.031. Epub 2016 Feb 23.
Hemocytes are tiny circulating blood cells of insects known to play multiple roles in physiological as well as cellular immune responses. However, the molecular nature of hemocytes in blood feeding insects, especially mosquitoes which transmit several deadly diseases such as malaria, dengue etc. is still limited. Therefore, to know the basic molecular composition of naïve mosquito hemocyte encoded proteins, we sequenced RNA-Seq library and analyzed a total of 13,105,858 Illumina sequencing reads in the mosquito Anopheles stephensi, an urban malarial vector in India. Denovo assembly approach yielded a buildup of 3025 contigs, for molecular and functional annotation. A total of 1829 contigs (48%) could be mapped to the mosquito transcript database, while out of remaining 1196 unmatched contigs, at least 1108 contigs i.e. 40% of total contigs, yielded a significant match to the available draft genome. ImmunoDB analysis predicted a total of 88 putative hemocyte transcripts belonging to 11 immune family proteins. A comprehensive molecular analysis of several unique transcripts including novel LRR, Holotricin, OBP, NiFU, that are involved in immunity, chemo sensing, cell-cell communication, nitrogen fixation/metabolism etc. provides initial evidence that mosquito hemocytes carry unique ability to meet and manage cell specific diverse functions of the mosquito blood. An unexpected observation of abundant transcripts encoding hypothetical proteins with unknown functions indicated that a much of the hemocyte biology remains to be understood.
血细胞是昆虫体内微小的循环血细胞,已知其在生理以及细胞免疫反应中发挥多种作用。然而,吸血昆虫尤其是传播疟疾、登革热等几种致命疾病的蚊子的血细胞分子特性仍然有限。因此,为了了解未受刺激的蚊子血细胞编码蛋白的基本分子组成,我们对RNA-Seq文库进行了测序,并分析了印度城市疟疾传播媒介斯氏按蚊中总共13,105,858条Illumina测序读数。从头组装方法产生了3025个重叠群,用于分子和功能注释。总共1829个重叠群(48%)可以映射到蚊子转录本数据库,而在其余1196个未匹配的重叠群中,至少1108个重叠群,即总重叠群的40%,与可用的基因组草图有显著匹配。ImmunoDB分析预测共有88个推定的血细胞转录本属于11种免疫家族蛋白。对包括新型LRR、全tricin、OBP、NiFU等几种参与免疫、化学传感、细胞间通讯、固氮/代谢等的独特转录本进行的全面分子分析提供了初步证据,表明蚊子血细胞具有独特的能力来满足和管理蚊子血液中细胞特异性的各种功能。对大量编码功能未知的假设蛋白的转录本的意外观察表明,血细胞生物学的许多方面仍有待了解。