Ibarrola-Villava Maider, Fleitas Tania, Llorca-Cardeñosa Marta J, Mongort Cristina, Alonso Elisa, Navarro Samuel, Burgues Octavio, Vivancos Ana, Cejalvo Juan Miguel, Perez-Fidalgo José Alejandro, Roselló Susana, Ribas Gloria, Cervantes Andrés
Hematology and Medical Oncology Unit, Biomedical Research Institute INCLIVA, Valencia, Spain.
Department of Pathology, Biomedical Research Institute INCLIVA, Valencia, Spain.
Oncotarget. 2016 Apr 19;7(16):22543-55. doi: 10.18632/oncotarget.8002.
Somatic mutation analysis represents a useful tool in selecting personalized therapy. The aim of our study was to determine the presence of common genetic events affecting actionable oncogenes using a MassARRAY technology in patients with advanced solid tumors who were potential candidates for target-based therapies. The analysis of 238 mutations across 19 oncogenes was performed in 197 formalin-fixed paraffin-embedded samples of different tumors using the OncoCarta Panel v1.0 (Sequenom Hamburg, Germany). Of the 197 specimens, 97 (49.2%) presented at least one mutation. Forty-nine different oncogenic mutations in 16 genes were detected. Mutations in KRAS and PIK3CA were detected in 40/97 (41.2%) and 30/97 (30.9%) patients respectively. Thirty-one patients (32.0%) had mutations in two genes, 20 of them (64.5%) initially diagnosed with colorectal cancer. The co-occurrence of mutation involved mainly KRAS, PIK3CA, KIT and RET. Mutation profiles were validated using a customized panel and the Junior Next-Generation Sequencing technology (GS-Junior 454, Roche). Twenty-eight patients participated in early clinical trials or received specific treatments according to the molecular characterization (28.0%). MassARRAY technology is a rapid and effective method for identifying key cancer-driving mutations across a large number of samples, which allows for a more appropriate selection for personalized therapies.
体细胞突变分析是选择个性化治疗的一项有用工具。我们研究的目的是使用MassARRAY技术,在晚期实体瘤患者(这些患者是基于靶点治疗的潜在候选对象)中,确定影响可操作致癌基因的常见遗传事件的存在情况。使用OncoCarta Panel v1.0(德国汉堡Sequenom公司),对197份不同肿瘤的福尔马林固定石蜡包埋样本中的19个致癌基因的238个突变进行了分析。在这197个样本中,97个(49.2%)至少存在一个突变。检测到16个基因中有49种不同的致癌突变。分别在40/97(41.2%)和30/97(30.9%)的患者中检测到KRAS和PIK3CA突变。31名患者(32.0%)有两个基因发生突变,其中20名(64.5%)最初被诊断为结直肠癌。突变的共现主要涉及KRAS、PIK3CA、KIT和RET。使用定制面板和Junior新一代测序技术(罗氏GS-Junior 454)对突变谱进行了验证。28名患者(28.0%)参与了早期临床试验或根据分子特征接受了特定治疗。MassARRAY技术是一种用于在大量样本中识别关键癌症驱动突变的快速有效方法,它有助于更合理地选择个性化治疗方案。