Wang Jimin
Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, Connecticut, 06520.
Protein Sci. 2016 Aug;25(8):1407-19. doi: 10.1002/pro.2934. Epub 2016 Jul 8.
The additions of oxygen and peroxide to residues that result when proteins are exposed to the free radicals produced using the Fenton reaction or X-rays have been studied for over a century. Nevertheless little is known about the impact these modifications have on protein crystal structures. Here evidence is presented that both kinds of modifications occur in protein crystals on a significant scale during the collection of X-ray diffraction data. For example, at least 538 of the 5,351 residues of protein molecules in the crystal used to obtain the structure for photosystem II described by the PDB accession number 3ARC became oxygenated during data collection.
蛋白质暴露于使用芬顿反应或X射线产生的自由基时所产生的残基上添加氧和过氧化物的研究已经进行了一个多世纪。然而,对于这些修饰对蛋白质晶体结构的影响知之甚少。这里有证据表明,在收集X射线衍射数据期间,这两种修饰在蛋白质晶体中大量发生。例如,用于获得PDB登录号3ARC描述的光系统II结构的晶体中,蛋白质分子的5351个残基中至少有538个在数据收集期间被氧化。