Suppr超能文献

两种深海花珊瑚物种的珊瑚相关细菌多样性具有保守性。

Coral-Associated Bacterial Diversity Is Conserved across Two Deep-Sea Anthothela Species.

作者信息

Lawler Stephanie N, Kellogg Christina A, France Scott C, Clostio Rachel W, Brooke Sandra D, Ross Steve W

机构信息

College of Marine Science, University of South Florida, St. Petersburg FL, USA.

U.S. Geological Survey, St. Petersburg Coastal and Marine Science Center, St. Petersburg FL, USA.

出版信息

Front Microbiol. 2016 Apr 5;7:458. doi: 10.3389/fmicb.2016.00458. eCollection 2016.

Abstract

Cold-water corals, similar to tropical corals, contain diverse and complex microbial assemblages. These bacteria provide essential biological functions within coral holobionts, facilitating increased nutrient utilization and production of antimicrobial compounds. To date, few cold-water octocoral species have been analyzed to explore the diversity and abundance of their microbial associates. For this study, 23 samples of the family Anthothelidae were collected from Norfolk (n = 12) and Baltimore Canyons (n = 11) from the western Atlantic in August 2012 and May 2013. Genetic testing found that these samples comprised two Anthothela species (Anthothela grandiflora and Anthothela sp.) and Alcyonium grandiflorum. DNA was extracted and sequenced with primers targeting the V4-V5 variable region of the 16S rRNA gene using 454 pyrosequencing with GS FLX Titanium chemistry. Results demonstrated that the coral host was the primary driver of bacterial community composition. Al. grandiflorum, dominated by Alteromonadales and Pirellulales had much higher species richness, and a distinct bacterial community compared to Anthothela samples. Anthothela species (A. grandiflora and Anthothela sp.) had very similar bacterial communities, dominated by Oceanospirillales and Spirochaetes. Additional analysis of core-conserved bacteria at 90% sample coverage revealed genus level conservation across Anthothela samples. This core included unclassified Oceanospirillales, Kiloniellales, Campylobacterales, and genus Spirochaeta. Members of this core were previously recognized for their functional capabilities in nitrogen cycling and suggest the possibility of a nearly complete nitrogen cycle within Anthothela species. Overall, many of the bacterial associates identified in this study have the potential to contribute to the acquisition and cycling of nutrients within the coral holobiont.

摘要

冷水珊瑚与热带珊瑚相似,含有多样且复杂的微生物群落。这些细菌在珊瑚共生体中发挥着重要的生物学功能,促进了营养物质利用率的提高以及抗菌化合物的产生。迄今为止,很少有冷水八放珊瑚物种被分析以探究其微生物共生体的多样性和丰度。在本研究中,2012年8月和2013年5月从西大西洋的诺福克(n = 12)和巴尔的摩峡谷(n = 11)采集了23个花笔螅科样本。基因检测发现这些样本包含两种花笔螅属物种(大花笔螅和一种未鉴定的花笔螅)以及大花软珊瑚。提取DNA并使用GS FLX Titanium化学的454焦磷酸测序技术,以靶向16S rRNA基因V4 - V5可变区的引物进行测序。结果表明,珊瑚宿主是细菌群落组成的主要驱动因素。大花软珊瑚以交替单胞菌目和梨形菌目为主,与花笔螅样本相比,具有更高的物种丰富度和独特的细菌群落。花笔螅属物种(大花笔螅和一种未鉴定的花笔螅)具有非常相似的细菌群落,以海洋螺菌目和螺旋体为主。在90%样本覆盖率下对核心保守细菌的进一步分析揭示了花笔螅样本在属水平上的保守性。这个核心包括未分类的海洋螺菌目、基洛尼菌目、弯曲菌目以及螺旋体属。该核心成员先前因其在氮循环中的功能能力而被认可,这表明花笔螅属物种内可能存在近乎完整的氮循环。总体而言,本研究中鉴定出的许多细菌共生体有可能促进珊瑚共生体内营养物质的获取和循环。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9fbe/4820459/bc86a4912232/fmicb-07-00458-g001.jpg

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验