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膜上的DNA纳米结构作为合成生物学工具

DNA Nanostructures on Membranes as Tools for Synthetic Biology.

作者信息

Czogalla Aleksander, Franquelim Henri G, Schwille Petra

机构信息

Department of Cytobiochemistry, Faculty of Biotechnology, University of Wrocław, Wrocław, Poland.

Department of Cellular and Molecular Biophysics, Max Planck Institute of Biochemistry, Martinsried, Germany.

出版信息

Biophys J. 2016 Apr 26;110(8):1698-1707. doi: 10.1016/j.bpj.2016.03.015.

Abstract

Over the last decade, functionally designed DNA nanostructures applied to lipid membranes prompted important achievements in the fields of biophysics and synthetic biology. Taking advantage of the universal rules for self-assembly of complementary oligonucleotides, DNA has proven to be an extremely versatile biocompatible building material on the nanoscale. The possibility to chemically integrate functional groups into oligonucleotides, most notably with lipophilic anchors, enabled a widespread usage of DNA as a viable alternative to proteins with respect to functional activity on membranes. As described throughout this review, hybrid DNA-lipid nanostructures can mediate events such as vesicle docking and fusion, or selective partitioning of molecules into phase-separated membranes. Moreover, the major benefit of DNA structural constructs, such as DNA tiles and DNA origami, is the reproducibility and simplicity of their design. DNA nanotechnology can produce functional structures with subnanometer precision and allow for a tight control over their biochemical functionality, e.g., interaction partners. DNA-based membrane nanopores and origami structures able to assemble into two-dimensional networks on top of lipid bilayers are recent examples of the manifold of complex devices that can be achieved. In this review, we will shortly present some of the potentially most relevant avenues and accomplishments of membrane-anchored DNA nanostructures for investigating, engineering, and mimicking lipid membrane-related biophysical processes.

摘要

在过去十年中,应用于脂质膜的功能化设计DNA纳米结构在生物物理学和合成生物学领域取得了重要成果。利用互补寡核苷酸自组装的通用规则,DNA已被证明是纳米尺度上一种极其通用的生物相容性建筑材料。将官能团化学整合到寡核苷酸中的可能性,尤其是通过亲脂性锚定基团,使得DNA在膜上的功能活性方面成为蛋白质的可行替代物并得到广泛应用。如本综述所述,DNA-脂质杂化纳米结构可以介导诸如囊泡对接和融合,或分子选择性分配到相分离膜中等事件。此外,DNA结构构建体,如DNA瓦片和DNA折纸的主要优点是其设计的可重复性和简单性。DNA纳米技术可以生产具有亚纳米精度的功能结构,并能严格控制其生化功能,例如相互作用伙伴。基于DNA的膜纳米孔和能够在脂质双层顶部组装成二维网络的折纸结构是可以实现的众多复杂装置的最新实例。在本综述中,我们将简要介绍膜锚定DNA纳米结构在研究、工程和模拟脂质膜相关生物物理过程方面一些可能最相关的途径和成就。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f7e3/4850321/b4aad45709e8/gr1.jpg

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