Zaccaria Edoardo, Wells Jerry M, van Baarlen Peter
Host-Microbe Interactomics, Animal Sciences, Wageningen University, Wageningen, The Netherlands.
PLoS One. 2016 May 5;11(5):e0153571. doi: 10.1371/journal.pone.0153571. eCollection 2016.
Natural genetic transformation is a transient, rapidly progressing energy-consuming process characterized by expression of the transformasome and competence-associated regulatory genes. This transient state is tightly controlled to avoid potentially adverse effects of genetic recombination on genome integrity during cell division. We investigated the global response of Streptococcus suis to exposure to the SigX competence-inducing peptide (XIP), and thus to the activation of the competence machinery, using time series analysis together with PCA analysis, gene clustering followed by heatmap visualisation, and GO enrichment analysis. We explored the possible regulatory link between metabolism and competence, and predicted the physiological adaptation of S. suis during competence induction, progression and exit using transcriptome analysis. We showed that competence development is associated with a suppression of basal metabolism, which may have consequences for the microbe's resilience to fluctuations in the environment, as competence is costly in terms of use of energy and protein translation. Furthermore our data suggest that several basal metabolic pathways are incompatible with activation of competence in S. suis. This study also showed that targeting specific pathways during the development of competence, might render S. suis more vulnerable toward novel antibiotic therapies.
自然遗传转化是一个短暂的、快速进展的耗能过程,其特征是转化体和感受态相关调控基因的表达。这种短暂状态受到严格控制,以避免细胞分裂过程中基因重组对基因组完整性产生潜在不利影响。我们使用时间序列分析、主成分分析、基因聚类并通过热图可视化以及基因本体富集分析,研究了猪链球菌暴露于SigX感受态诱导肽(XIP)并因此激活感受态机制后的全局反应。我们探索了代谢与感受态之间可能的调控联系,并通过转录组分析预测了猪链球菌在感受态诱导、进展和退出过程中的生理适应性。我们表明,感受态的发展与基础代谢的抑制有关,这可能会影响微生物对环境波动的恢复能力,因为感受态在能量利用和蛋白质翻译方面成本高昂。此外,我们的数据表明,几种基础代谢途径与猪链球菌感受态的激活不相容。这项研究还表明,在感受态发展过程中靶向特定途径,可能会使猪链球菌对新型抗生素治疗更敏感。