Mulder Joyce, Wels Michiel, Kuipers Oscar P, Kleerebezem Michiel, Bron Peter A
Molecular Genetics, University of Groningen, Groningen, The Netherlands.
NIZO B.V., Ede, The Netherlands.
Appl Environ Microbiol. 2017 Sep 29;83(20). doi: 10.1128/AEM.01320-17. Print 2017 Oct 15.
In biotechnological workhorses like and , natural competence can be induced, which facilitates genetic manipulation of these microbes. However, in strains of the important dairy starter , natural competence has not been established to date. However, analysis of the complete genome sequences of 43 strains revealed complete late competence gene sets in 2 subsp. strains (KW2 and KW10) and at least 10 subsp. strains, including the model strain IL1403 and the plant-derived strain KF147. The remainder of the strains, including all dairy isolates, displayed genomic decay in one or more of the late competence genes. Nisin-controlled expression of the competence regulator in subsp. KF147 resulted in the induction of expression of the canonical competence regulon and elicited a state of natural competence in this strain. In contrast, expression in NZ9000, which was predicted to encode an incomplete competence gene set, failed to induce natural competence. Moreover, mutagenesis of the operon in strain KF147 abolished the -driven natural competence, underlining the involvement of the competence machinery. Finally, introduction of nisin-inducible expression into -harboring derivatives of strains IL1403 and KW2 allowed the induction of natural competence in these strains also, expanding this phenotype to other strains of both subspecies. Specific bacterial species are able to enter a state of natural competence in which DNA is taken up from the environment, allowing the introduction of novel traits. Strains of the species are very important starter cultures for the fermentation of milk in the cheese production process, where these bacteria contribute to the flavor and texture of the end product. The activation of natural competence in this industrially relevant organism can accelerate research aiming to understand industrially relevant traits of these bacteria and can facilitate engineering strategies to harness the natural biodiversity of the species in optimized starter strains.
在诸如枯草芽孢杆菌和肺炎链球菌等生物技术常用菌株中,可以诱导自然感受态,这有利于对这些微生物进行基因操作。然而,对于重要的乳制品发酵剂乳酸乳球菌菌株而言,迄今为止尚未建立自然感受态。不过,对43株乳酸乳球菌菌株的全基因组序列分析显示,在乳酸乳球菌乳酸亚种的2个菌株(KW2和KW10)以及至少10个乳酸乳球菌乳脂亚种菌株中存在完整的晚期感受态基因集,包括模式菌株IL1403和植物源菌株KF147。其余菌株,包括所有乳制品分离株,在一个或多个晚期感受态基因中表现出基因组衰退。在乳酸乳球菌乳脂亚种KF147中,通过乳酸链球菌素控制的感受态调节因子ComX的表达导致了典型感受态调节子的表达诱导,并在该菌株中引发了自然感受态状态。相比之下,在预计编码不完整感受态基因集的乳酸乳球菌NZ9000中的ComX表达未能诱导自然感受态。此外,对菌株KF147中ComX操纵子的诱变消除了ComX驱动的自然感受态,强调了感受态机制的参与。最后,将乳酸链球菌素诱导的ComX表达引入乳酸乳球菌乳脂亚种IL1403和KW2的含ComX衍生物中,也使得这些菌株能够诱导自然感受态,将这种表型扩展到两个亚种的其他乳酸乳球菌菌株。特定细菌物种能够进入自然感受态,从环境中摄取DNA,从而引入新的性状。乳酸乳球菌属的菌株是奶酪生产过程中牛奶发酵非常重要的起始培养物,这些细菌对最终产品的风味和质地有贡献。在这种与工业相关的生物体中激活自然感受态可以加速旨在了解这些细菌与工业相关性状的研究,并有助于实施工程策略,以利用该物种的自然生物多样性培育优化的起始菌株。