Wu Zhenying, Cao Yingping, Yang Ruijuan, Qi Tianxiong, Hang Yuqing, Lin Hao, Zhou Gongke, Wang Zeng-Yu, Fu Chunxiang
Key Laboratory of Biofuels, Shandong Provincial Key Laboratory of Energy Genetics, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, 266101 China ; Key Laboratory of Biofuels, Qingdao Engineering Research Center of Biomass Resources and Environment, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, 266101 Shandong China.
Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081 China.
Biotechnol Biofuels. 2016 May 5;9:101. doi: 10.1186/s13068-016-0516-z. eCollection 2016.
Switchgrass (Panicum virgatum L.) is a dedicated lignocellulosic feedstock for bioenergy production. The SQUAMOSA PROMOTER-BINDING PROTEIN (SBP-box)-LIKE transcription factors (SPLs) change plant architecture and vegetative-to-reproductive phase transition significantly, and as such, they are promising candidates for genetic improvement of switchgrass biomass yield. However, the genome-wide identification and functional characterization of SPL genes have yet to be investigated in herbaceous energy crops.
We identified 35 full-length SPL genes in the switchgrass genome. The phylogenetic relationship and expression pattern of PvSPLs provided baseline information for their function characterization. Based on the global overview of PvSPLs, we explored the biological function of miR156-targeted PvSPL1 and PvSPL2, which are closely related members of SPL family in switchgrass. Our results showed that PvSPL1 and PvSPL2 acted redundantly to modulate side tiller initiation, whereas they did not affect phase transition and internode initiation. Consistently, overexpression of the miR156-resistant rPvSPL2 in the miR156-overexpressing transgenic plants greatly reduced tiller initiation, but did not rescue the delayed flowering and increased internode numbers. Furthermore, suppression of PvSPL2 activity in switchgrass increased biomass yield and reduced lignin accumulation, which thereby elevated the total amount of solubilized sugars.
Our results indicate that different miR156-targeted PvSPL subfamily genes function predominantly in certain biological processes in switchgrass. We suggest that PvSPL2 and its paralogs can be utilized as the valuable targets in molecular breeding of energy crops for developing novel germplasms with high biofuel production.
柳枝稷(Panicum virgatum L.)是用于生物能源生产的专用木质纤维素原料。类SQUAMOSA启动子结合蛋白(SBP-box)转录因子(SPLs)显著改变植物形态以及营养生长向生殖生长的阶段转变,因此,它们是柳枝稷生物质产量遗传改良的有潜力候选基因。然而,草本能源作物中SPL基因的全基因组鉴定和功能表征尚未得到研究。
我们在柳枝稷基因组中鉴定出35个全长SPL基因。柳枝稷PvSPLs的系统发育关系和表达模式为其功能表征提供了基础信息。基于对PvSPLs的全面概述,我们探究了miR156靶向的PvSPL1和PvSPL2的生物学功能,它们是柳枝稷中SPL家族的密切相关成员。我们的结果表明,PvSPL1和PvSPL2在调节侧枝起始方面发挥冗余作用,而它们不影响阶段转变和节间起始。同样,在过表达miR156的转基因植物中过表达抗miR156的rPvSPL2极大地减少了分蘖起始,但没有挽救延迟开花和增加节间数量。此外,抑制柳枝稷中PvSPL2的活性提高了生物质产量并减少了木质素积累,从而增加了可溶性糖的总量。
我们的结果表明,不同的miR156靶向的PvSPL亚家族基因在柳枝稷的某些生物学过程中起主要作用。我们建议,PvSPL2及其旁系同源基因可作为能源作物分子育种中的有价值靶点,用于开发具有高生物燃料产量的新型种质。