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利用电子病历数据进行伴侣动物的症候群监测:概念的开发与验证

Syndromic surveillance in companion animals utilizing electronic medical records data: development and proof of concept.

作者信息

Kass Philip H, Weng Hsin-Yi, Gaona Mark A L, Hille Amy, Sydow Max H, Lund Elizabeth M, Markwell Peter J

机构信息

Department of Population Health and Reproduction, University of California , Davis, CA , USA.

Department of Population Health and Reproduction, University of California, Davis, CA, USA; Current affiliation: Department of Comparative Pathobiology, Purdue University, West Lafayette, IN, USA.

出版信息

PeerJ. 2016 May 5;4:e1940. doi: 10.7717/peerj.1940. eCollection 2016.

Abstract

In an effort to recognize and address communicable and point-source epidemics in dog and cat populations, this project created a near real-time syndromic surveillance system devoted to companion animal health in the United States. With over 150 million owned pets in the US, the development of such a system is timely in light of previous epidemics due to various causes that were only recognized in retrospect. The goal of this study was to develop epidemiologic and statistical methods for veterinary hospital-based surveillance, and to demonstrate its efficacy by detection of simulated foodborne outbreaks using a database of over 700 hospitals. Data transfer protocols were established via a secure file transfer protocol site, and a data repository was constructed predominantly utilizing open-source software. The daily proportion of patients with a given clinical or laboratory finding was contrasted with an equivalent average proportion from a historical comparison period, allowing construction of the proportionate diagnostic outcome ratio and its confidence interval for recognizing aberrant heath events. A five-tiered alert system was used to facilitate daily assessment of almost 2,000 statistical analyses. Two simulated outbreak scenarios were created by independent experts, blinded to study investigators, and embedded in the 2010 medical records. Both outbreaks were detected almost immediately by the alert system, accurately detecting species affected using relevant clinical and laboratory findings, and ages involved. Besides demonstrating proof-in-concept of using veterinary hospital databases to detect aberrant events in space and time, this research can be extended to conducting post-detection etiologic investigations utilizing exposure information in the medical record.

摘要

为了识别和应对犬猫群体中的传染病和点源流行病,该项目创建了一个近乎实时的症候群监测系统,专门用于美国伴侣动物的健康监测。美国有超过1.5亿只宠物,鉴于之前因各种原因引发的流行病,直到事后才被发现,因此开发这样一个系统很及时。本研究的目的是开发基于兽医医院监测的流行病学和统计方法,并通过使用一个包含700多家医院的数据库检测模拟食源性疾病暴发来证明其有效性。通过安全文件传输协议站点建立了数据传输协议,并主要利用开源软件构建了一个数据存储库。将具有特定临床或实验室检查结果的患者的每日比例与历史对照期的等效平均比例进行对比,从而构建比例诊断结果率及其置信区间,以识别异常健康事件。使用一个五级警报系统来促进对近2000项统计分析的每日评估。由独立专家创建了两种模拟暴发情景,对研究调查人员保密,并嵌入到2010年的医疗记录中。警报系统几乎立即检测到了这两次暴发,利用相关临床和实验室检查结果准确检测出受影响的物种以及涉及的年龄。除了证明利用兽医医院数据库在时空上检测异常事件的概念验证外,这项研究还可以扩展到利用医疗记录中的暴露信息进行检测后的病因调查。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1b1d/4860311/e91b7b1f2374/peerj-04-1940-g001.jpg

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