Suppr超能文献

水决定蛋白质的结构与动力学。

Water Determines the Structure and Dynamics of Proteins.

作者信息

Bellissent-Funel Marie-Claire, Hassanali Ali, Havenith Martina, Henchman Richard, Pohl Peter, Sterpone Fabio, van der Spoel David, Xu Yao, Garcia Angel E

机构信息

Laboratoire Léon Brillouin (CEA-CNRS) CEA Saclay F-91191 Gif Sur Yvette, France.

International Center for Theoretical Physics, Condensed Matter and Statistical Physics 34151 Trieste, Italy.

出版信息

Chem Rev. 2016 Jul 13;116(13):7673-97. doi: 10.1021/acs.chemrev.5b00664. Epub 2016 May 17.

Abstract

Water is an essential participant in the stability, structure, dynamics, and function of proteins and other biomolecules. Thermodynamically, changes in the aqueous environment affect the stability of biomolecules. Structurally, water participates chemically in the catalytic function of proteins and nucleic acids and physically in the collapse of the protein chain during folding through hydrophobic collapse and mediates binding through the hydrogen bond in complex formation. Water is a partner that slaves the dynamics of proteins, and water interaction with proteins affect their dynamics. Here we provide a review of the experimental and computational advances over the past decade in understanding the role of water in the dynamics, structure, and function of proteins. We focus on the combination of X-ray and neutron crystallography, NMR, terahertz spectroscopy, mass spectroscopy, thermodynamics, and computer simulations to reveal how water assist proteins in their function. The recent advances in computer simulations and the enhanced sensitivity of experimental tools promise major advances in the understanding of protein dynamics, and water surely will be a protagonist.

摘要

水是蛋白质和其他生物分子稳定性、结构、动力学及功能的重要参与者。从热力学角度来看,水环境的变化会影响生物分子的稳定性。在结构方面,水在化学上参与蛋白质和核酸的催化功能,在物理上通过疏水塌缩参与蛋白质折叠过程中蛋白质链的塌缩,并在复合物形成过程中通过氢键介导结合。水是影响蛋白质动力学的一个因素,水与蛋白质的相互作用会影响其动力学。在此,我们综述过去十年间在理解水在蛋白质动力学、结构和功能中作用方面的实验和计算进展。我们着重介绍X射线和中子晶体学、核磁共振、太赫兹光谱、质谱、热力学以及计算机模拟的结合,以揭示水如何协助蛋白质发挥功能。计算机模拟的最新进展以及实验工具灵敏度的提高有望在理解蛋白质动力学方面取得重大进展,而水无疑将成为其中的关键因素。

相似文献

1
Water Determines the Structure and Dynamics of Proteins.水决定蛋白质的结构与动力学。
Chem Rev. 2016 Jul 13;116(13):7673-97. doi: 10.1021/acs.chemrev.5b00664. Epub 2016 May 17.
3
Contribution of Water to Pressure and Cold Denaturation of Proteins.水对蛋白质压力变性和冷变性的影响
Phys Rev Lett. 2015 Sep 4;115(10):108101. doi: 10.1103/PhysRevLett.115.108101. Epub 2015 Sep 1.

引用本文的文献

6
Heat generation in spatially confined solids through electronic light scattering.通过电子光散射在空间受限固体中产生热量。
Nanophotonics. 2025 Jun 19;14(14):2411-2418. doi: 10.1515/nanoph-2025-0118. eCollection 2025 Jul.
10
The lipid bilayer strengthens the cooperative network of membrane proteins.脂质双层增强了膜蛋白的协同网络。
Sci Adv. 2025 Jul 4;11(27):eadv9568. doi: 10.1126/sciadv.adv9568. Epub 2025 Jul 2.

本文引用的文献

6
How amide hydrogens exchange in native proteins.天然蛋白质中的酰胺氢如何交换。
Proc Natl Acad Sci U S A. 2015 Aug 18;112(33):10383-8. doi: 10.1073/pnas.1506079112. Epub 2015 Jul 20.
8
Hydration water mobility is enhanced around tau amyloid fibers.在tau淀粉样纤维周围,水化水的流动性增强。
Proc Natl Acad Sci U S A. 2015 May 19;112(20):6365-70. doi: 10.1073/pnas.1422824112. Epub 2015 Apr 27.
10
Homologous ligands accommodated by discrete conformations of a buried cavity.由埋藏腔的离散构象容纳的同源配体。
Proc Natl Acad Sci U S A. 2015 Apr 21;112(16):5039-44. doi: 10.1073/pnas.1500806112. Epub 2015 Apr 6.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验