Department of Biology, Faculty of Mathematics and Natural Sciences, Universitas Indonesia, Kampus UI Depok, 16424, Indonesia.
Center of Excellence for Indigenous Biological Resources-Genome Studies, Faculty of Mathematics and Natural Sciences, Universitas Indonesia, Kampus UI Depok, 16424, Indonesia.
Int J Syst Evol Microbiol. 2016 Aug;66(8):3088-3094. doi: 10.1099/ijsem.0.001151. Epub 2016 May 17.
A Gram-stain-positive, endospore-forming, aerobic and thermophilic bacterium, designated strain LC2-13AT, was isolated from Cisolok geyser, West Java, Indonesia, at 50 °C. The isolate was rod-shaped and motile by means of peritrichous flagella. The major cellular fatty acids were iso-C16 : 0, C16 : 0 and anteiso-C15 : 0 and the major quinone was menaquinone 7. The major polar lipids were diphosphatidylglycerol, phosphatidylglycerol and phosphatidylethanolamine. The genomic DNA G+C content was 56.6 mol% and the major diagnostic diamino acid in the cell-wall peptidoglycan was meso-diaminopimelic acid. Phylogenetic analysis based on the 16S rRNA gene sequence indicated that strain LC2-13AT is related most closely to Paenibacillus kobensis DSM 10249T (94.86 % similarity), Paenibacillus tarimensis SA-7-6T (94.77 %) and Paenibacillus barengoltzii SAFN-016T (94.77 %). On the basis of phenotypic, chemotaxonomic and phylogenetic evidence, strain LC2-13AT is affiliated to the genus Paenibacillus, but could be distinguished from recognized species of this genus. A novel species with the name Paenibacillus cisolokensis sp. nov. is thus proposed. The type strain is LC2-13AT (=UICC B-42T=NRRL B-65368T=DSM 101873T).
一株革兰氏阳性、产芽孢、需氧和嗜热的细菌,被命名为 LC2-13AT 菌株,从印度尼西亚西爪哇的 Cisolok 间歇泉中分离出来,最适生长温度为 50°C。该分离物呈杆状,通过周生鞭毛运动。主要细胞脂肪酸为 iso-C16:0、C16:0 和 anteiso-C15:0,主要醌为menaquinone 7。主要极性脂为双磷脂酰甘油、磷脂酰甘油和磷脂酰乙醇胺。基因组 DNA G+C 含量为 56.6 mol%,细胞壁肽聚糖中的主要二氨基庚二酸是 meso-二氨基庚二酸。基于 16S rRNA 基因序列的系统发育分析表明,LC2-13AT 菌株与 Paenibacillus kobensis DSM 10249T(94.86%相似性)、Paenibacillus tarimensis SA-7-6T(94.77%相似性)和 Paenibacillus barengoltzii SAFN-016T(94.77%相似性)最为密切相关。基于表型、化学分类和系统发育证据,LC2-13AT 菌株属于 Paenibacillus 属,但可与该属的公认种区分开来。因此,提出了一个新的物种,命名为 Paenibacillus cisolokensis sp. nov。模式菌株为 LC2-13AT(=UICC B-42T=NRRL B-65368T=DSM 101873T)。