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精准医学中临床可操作遗传变异的鉴定挑战。

Challenges of Identifying Clinically Actionable Genetic Variants for Precision Medicine.

机构信息

Center for Human Genetics, Marshfield Clinic Research Foundation, Marshfield, WI 54449, USA.

Biomedical Informatics Research Center, Marshfield Clinic Research Foundation, Marshfield, WI 54449, USA.

出版信息

J Healthc Eng. 2016;2016. doi: 10.1155/2016/3617572.

Abstract

Advances in genomic medicine have the potential to change the way we treat human disease, but translating these advances into reality for improving healthcare outcomes depends essentially on our ability to discover disease- and/or drug-associated clinically actionable genetic mutations. Integration and manipulation of diverse genomic data and comprehensive electronic health records (EHRs) on a big data infrastructure can provide an efficient and effective way to identify clinically actionable genetic variants for personalized treatments and reduce healthcare costs. We review bioinformatics processing of next-generation sequencing (NGS) data, bioinformatics infrastructures for implementing precision medicine, and bioinformatics approaches for identifying clinically actionable genetic variants using high-throughput NGS data and EHRs.

摘要

基因组医学的进步有可能改变我们治疗人类疾病的方式,但将这些进展转化为改善医疗保健结果的现实,本质上取决于我们发现与疾病和/或药物相关的临床可操作遗传突变的能力。在大数据基础设施上整合和操作多样化的基因组数据和全面的电子健康记录 (EHR) 可以为个性化治疗提供一种高效、有效的方法来识别临床可操作的遗传变异,并降低医疗保健成本。我们回顾了下一代测序 (NGS) 数据的生物信息学处理、实施精准医学的生物信息学基础设施,以及使用高通量 NGS 数据和 EHR 识别临床可操作遗传变异的生物信息学方法。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bfb0/5058575/2d980c9095f3/JHE2016-3617572.001.jpg

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