Bhalothia Purva, Sangwan Chetna, Alok Anshu, Mehrotra Sandhya, Mehrotra Rajesh
Department of Biological Sciences, Birla Institute of Technology and Sciences Pilani, India.
Department of Biotechnology, National Agri-Food Biotechnology Institute Punjab, India.
Front Plant Sci. 2016 May 3;7:547. doi: 10.3389/fpls.2016.00547. eCollection 2016.
Gene expression is mediated through interaction between cis regulatory elements and its cognate transcription factors. Cis regulatory elements are defined as non-coding DNA sequences that provide the binding sites for transcription factors and are clustered in the upstream region of genes. ACGT cis regulatory element is one of the important cis regulatory elements found to be involved in diverse biological processes like auxin response, salicylic acid (SA) response, UV light response, ABA response and jasmonic acid (JA) response. We identified through in silico analysis that the upstream region of protein phosphatase 2C (PP2C) gene has a distinct genetic architecture of ACGT elements. In the present study, the activation of the full length promoter and its deletion constructs like 900 base pair, 500 base pair, 400 base pair and NRM (Nathji Rajesh Mehrotra) were examined by stable transformation in Arabidopsis thaliana using β-glucuronidase as the reporter gene. Evaluation of deletion constructs of PP2C-like promoter was carried out in the presence of phytohormones like abscisic acid (ABA), SA and JA. Our result indicated that the full length and 900 base pair promoter-reporter constructs of PP2C-like promoter was induced in response to ABA but not to methyl jasmonate and SA.
基因表达是通过顺式调控元件与其同源转录因子之间的相互作用介导的。顺式调控元件被定义为非编码DNA序列,它为转录因子提供结合位点,并聚集在基因的上游区域。ACGT顺式调控元件是发现参与多种生物学过程的重要顺式调控元件之一,如生长素反应、水杨酸(SA)反应、紫外线反应、脱落酸(ABA)反应和茉莉酸(JA)反应。我们通过计算机分析确定,蛋白磷酸酶2C(PP2C)基因的上游区域具有独特的ACGT元件基因结构。在本研究中,使用β-葡萄糖醛酸酶作为报告基因,通过在拟南芥中的稳定转化来检测全长启动子及其缺失构建体(如900碱基对、500碱基对、400碱基对和NRM(Nathji Rajesh Mehrotra))的活性。在脱落酸(ABA)、SA和JA等植物激素存在的情况下,对PP2C样启动子的缺失构建体进行了评估。我们的结果表明,PP2C样启动子的全长和900碱基对启动子-报告基因构建体对ABA有反应,但对茉莉酸甲酯和SA没有反应。