De Maayer Pieter, Cowan Don A
Centre for Microbial Ecology and Genomics, University of Pretoria, 0002, Pretoria, South Africa.
Department of Microbiology, University of Pretoria, 0002, Pretoria, South Africa.
BMC Genomics. 2016 May 20;17:377. doi: 10.1186/s12864-016-2735-x.
Post-translational glycosylation of the flagellin protein is relatively common among Gram-negative bacteria, and has been linked to several phenotypes, including flagellar biosynthesis and motility, biofilm formation, host immune evasion and manipulation and virulence. However to date, despite extensive physiological and genetic characterization, it has never been reported for the peritrichously flagellate Enterobacteriaceae.
Using comparative genomic approaches we analyzed 2,000 representative genomes of Enterobacteriaceae, and show that flagellin glycosylation islands are relatively common and extremely versatile among members of this family. Differences in the G + C content of the FGIs and the rest of the genome and the presence of mobile genetic elements provide evidence of horizontal gene transfer occurring within the FGI loci. These loci therefore encode highly variable flagellin glycan structures, with distinct sugar backbones, heavily substituted with formyl, methyl, acetyl, lipoyl and amino groups. Additionally, an N-lysine methylase, FliB, previously identified only in the enterobacterial pathogen Salmonella enterica, is relatively common among several distinct taxa within the family. These flagellin methylase island loci (FMIs), in contrast to the FGI loci, appear to be stably maintained within these diverse lineages.
The prevalence and versatility of flagellin modification loci, both glycosylation and methylation loci, suggests they play important biological roles among the Enterobacteriaceae.
鞭毛蛋白的翻译后糖基化在革兰氏阴性菌中较为常见,并且与多种表型相关,包括鞭毛生物合成与运动性、生物膜形成、宿主免疫逃避与操控以及毒力。然而迄今为止,尽管进行了广泛的生理学和遗传学特征分析,但对于周生鞭毛的肠杆菌科细菌,尚未有相关报道。
我们使用比较基因组学方法分析了2000个肠杆菌科代表性基因组,结果表明鞭毛蛋白糖基化岛在该科成员中相对常见且极其多样。糖基化岛与基因组其余部分的G + C含量差异以及移动遗传元件的存在,为糖基化岛位点内发生的水平基因转移提供了证据。因此,这些位点编码高度可变的鞭毛蛋白聚糖结构,具有不同的糖骨架,被甲酰基、甲基、乙酰基、硫辛酰基和氨基大量取代。此外,一种N - 赖氨酸甲基转移酶FliB,此前仅在肠道病原菌肠炎沙门氏菌中发现,在该科内几个不同分类群中相对常见。与糖基化岛位点不同,这些鞭毛蛋白甲基化岛位点(FMI)在这些不同谱系中似乎稳定存在。
鞭毛蛋白修饰位点,即糖基化和甲基化位点的普遍性和多样性表明它们在肠杆菌科中发挥着重要的生物学作用。