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通过全基因组测序调查尼日利亚不同来源的埃科沙门氏菌以确定人类感染源。

Investigating Salmonella Eko from Various Sources in Nigeria by Whole Genome Sequencing to Identify the Source of Human Infections.

作者信息

Leekitcharoenphon Pimlapas, Raufu Ibrahim, Nielsen Mette T, Rosenqvist Lund Birthe S, Ameh James A, Ambali Abdul G, Sørensen Gitte, Le Hello Simon, Aarestrup Frank M, Hendriksen Rene S

机构信息

National Food Institute, Technical University of Denmark, WHO Collaborating Center for Antimicrobial Resistance in Foodborne Pathogens and European Union Reference Laboratory for Antimicrobial Resistance, Kgs. Lyngby, Denmark.

Faculty of Veterinary Medicine, Department of Veterinary Microbiology, University of Ilorin, Ilorin, Nigeria.

出版信息

PLoS One. 2016 May 26;11(5):e0156212. doi: 10.1371/journal.pone.0156212. eCollection 2016.

Abstract

Twenty-six Salmonella enterica serovar Eko isolated from various sources in Nigeria were investigated by whole genome sequencing to identify the source of human infections. Diversity among the isolates was observed and camel and cattle were identified as the primary reservoirs and the most likely source of the human infections.

摘要

对从尼日利亚不同来源分离出的26株肠炎沙门氏菌埃科血清型菌株进行了全基因组测序,以确定人类感染的源头。观察到这些分离株之间存在多样性,骆驼和牛被确定为主要宿主以及人类感染最可能的源头。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5a76/4881965/43a23bf1e615/pone.0156212.g001.jpg

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本文引用的文献

1
CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP.
Evolution. 1985 Jul;39(4):783-791. doi: 10.1111/j.1558-5646.1985.tb00420.x.
3
Solving the problem of comparing whole bacterial genomes across different sequencing platforms.
PLoS One. 2014 Aug 11;9(8):e104984. doi: 10.1371/journal.pone.0104984. eCollection 2014.
4
In silico detection and typing of plasmids using PlasmidFinder and plasmid multilocus sequence typing.
Antimicrob Agents Chemother. 2014 Jul;58(7):3895-903. doi: 10.1128/AAC.02412-14. Epub 2014 Apr 28.
5
Diversity and antimicrobial susceptibility of Salmonella enterica serovars isolated from pig farms in Ibadan, Nigeria.
Folia Microbiol (Praha). 2014 Jan;59(1):69-77. doi: 10.1007/s12223-013-0270-6. Epub 2013 Jul 28.
7
snpTree--a web-server to identify and construct SNP trees from whole genome sequence data.
BMC Genomics. 2012;13 Suppl 7(Suppl 7):S6. doi: 10.1186/1471-2164-13-S7-S6. Epub 2012 Dec 13.
8
Identification of acquired antimicrobial resistance genes.
J Antimicrob Chemother. 2012 Nov;67(11):2640-4. doi: 10.1093/jac/dks261. Epub 2012 Jul 10.
9
Multilocus sequence typing as a replacement for serotyping in Salmonella enterica.
PLoS Pathog. 2012;8(6):e1002776. doi: 10.1371/journal.ppat.1002776. Epub 2012 Jun 21.

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