State Key Laboratory of Genetic Resources and Evolution, and Yunnan Laboratory of Molecular Biology of Domestic Animals, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming 650223, Yunnan Kunming College of Life Science, University of Chinese Academy of Sciences, Kunming 650204, Yunnan.
State Key Laboratory of Genetic Resources and Evolution, and Yunnan Laboratory of Molecular Biology of Domestic Animals, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming 650223, Yunnan.
Syst Biol. 2016 Sep;65(5):824-42. doi: 10.1093/sysbio/syw055. Epub 2016 Jun 10.
True frogs of the genus Rana are widely used as model organisms in studies of development, genetics, physiology, ecology, behavior, and evolution. Comparative studies among the more than 100 species of Rana rely on an understanding of the evolutionary history and patterns of diversification of the group. We estimate a well-resolved, time-calibrated phylogeny from sequences of six nuclear and three mitochondrial loci sampled from most species of Rana, and use that phylogeny to clarify the group's diversification and global biogeography. Our analyses consistently support an "Out of Asia" pattern with two independent dispersals of Rana from East Asia to North America via Beringian land bridges. The more species-rich lineage of New World Rana appears to have experienced a rapid radiation following its colonization of the New World, especially with its expansion into montane and tropical areas of Mexico, Central America, and South America. In contrast, Old World Rana exhibit different trajectories of diversification; diversification in the Old World began very slowly and later underwent a distinct increase in speciation rate around 29-18 Ma. Net diversification is associated with environmental changes and especially intensive tectonic movements along the Asian margin from the Oligocene to early Miocene. Our phylogeny further suggests that previous classifications were misled by morphological homoplasy and plesiomorphic color patterns, as well as a reliance primarily on mitochondrial genes. We provide a phylogenetic taxonomy based on analyses of multiple nuclear and mitochondrial gene loci. [Amphibians; biogeography; diversification rate; Holarctic; transcontinental dispersal.
真正的蛙属青蛙被广泛用作发育、遗传学、生理学、生态学、行为和进化研究的模式生物。对超过 100 种青蛙的比较研究依赖于对该组进化历史和多样化模式的理解。我们从大多数青蛙物种中采样的六个核和三个线粒体基因座的序列估计了一个分辨率高、时间校准的系统发育,并使用该系统发育来澄清该组的多样化和全球生物地理学。我们的分析一致支持“亚洲以外”的模式,即有两个独立的蛙属从东亚通过白令陆桥扩散到北美洲。新大陆的青蛙属的物种更为丰富,似乎在其殖民新大陆后经历了快速辐射,特别是在其扩展到墨西哥、中美洲和南美洲的山地和热带地区。相比之下,旧大陆的青蛙属表现出不同的多样化轨迹;旧大陆的多样化开始非常缓慢,然后在 29-18 Ma 左右经历了一个独特的物种形成率增加。净多样化与环境变化有关,尤其是从中始新世到早中新世亚洲边缘的剧烈构造运动。我们的系统发育进一步表明,先前的分类受到形态同功和原始颜色模式的误导,以及主要依赖线粒体基因。我们提供了一种基于多个核和线粒体基因座分析的系统发育分类法。[两栖动物;生物地理学;多样化率;全北界;跨大陆扩散。