人源分离株蜂房哈夫尼亚菌HUMV-5920的全基因组序列
Whole-Genome Sequence of Hafnia alvei HUMV-5920, a Human Isolate.
作者信息
Lázaro-Díez María, Redondo-Salvo Santiago, Arboleya-Agudo Aroa, Ocejo-Vinyals Javier Gonzalo, Chapartegui-González Itziar, Ocampo-Sosa Alain A, Acosta Felix, Martínez-Martínez Luis, Ramos-Vivas José
机构信息
Servicio de Microbiología, Hospital Universitario Marqués de Valdecilla, Santander, Cantabria, Spain Instituto de Investigación Sanitaria Valdecilla (IDIVAL), Santander, Cantabria, Spain Red Española de Investigación en Patología Infecciosa (REIPI), Instituto de Salud Carlos III, Madrid, Spain.
Instituto de Investigación en Ingeniería de Aragón (I3A), Universidad de Zaragoza, Zaragoza, Spain.
出版信息
Genome Announc. 2016 Jun 16;4(3):e00556-16. doi: 10.1128/genomeA.00556-16.
A clinical isolate of Hafnia alvei (strain HUMV-5920) was obtained from a urine sample from an adult patient. We report here its complete genome assembly using PacBio single-molecule real-time (SMRT) sequencing, which resulted in a chromosome with 4.5 Mb and a circular contig of 87 kb. About 4,146 protein-coding genes are predicted from this assembly.
从一名成年患者的尿液样本中获得了蜂房哈夫尼亚菌的临床分离株（菌株HUMV - 5920）。我们在此报告使用PacBio单分子实时（SMRT）测序对其进行的全基因组组装，结果得到一条4.5 Mb的染色体和一个87 kb的环状重叠群。从该组装中预测出约4146个蛋白质编码基因。
Zotero 插件