Kumar Ram, Kushwah Jyoti, Ganguly Sudershan, Garg Veena, Somvanshi Vishal S
Division of Nematology, ICAR- Indian Agricultural Research Institute, Pusa Campus, New Delhi, 110012 India.
ICAR-National Research Center on Plant Biotechnology, Pusa Campus, New Delhi, 110012 India.
Indian J Microbiol. 2016 Sep;56(3):361-367. doi: 10.1007/s12088-016-0594-4. Epub 2016 May 28.
Majority of animals form symbiotic relationships with bacteria. Based on the number of bacterial species associating with an animal, these symbiotic associations can be mono-specific, relatively simple (2-25 bacterial species/animal) or highly complex (>10(2)-10(3) bacterial species/animal). Photorhabdus (family-Enterobacteriaceae) forms a mono-specific symbiotic relationship with the entomopathogenic nematode Heterorhabditis. This system provides a tractable genetic model for animal-microbe symbiosis studies. Here, we investigated the bacterial factors that may be responsible for governing host specificity between nematode and their symbiont bacteria using proteomics approach. Total protein profiles of P. luminescens ssp. laumondii (host nematode- H. bacteriophora) and P. luminescens ssp. akhurstii (host nematode- H. indica) were compared using 2-D gel electrophoresis, followed by identification of differentially expressed proteins by MALDI-TOF MS. Thirty-nine unique protein spots were identified - 24 from P. luminescens ssp. laumondii and 15 from P. luminescens ssp. akhurstii. These included proteins that might be involved in determining host specificity directly (for e.g. pilin FimA, outer membrane protein A), indirectly through effect on bacterial secondary metabolism (for e.g. malate dehydrogenase Mdh, Pyruvate formate-lyase PflA, flavo protein WrbA), or in a yet unknown manner (for e.g. hypothetical proteins, transcription regulators). Further functional validation is needed to establish the role of these bacterial proteins in nematode-host specificity.
大多数动物与细菌形成共生关系。根据与动物相关联的细菌种类数量,这些共生关系可以是单特异性的、相对简单的(2 - 25种细菌/动物)或高度复杂的(>10² - 10³种细菌/动物)。发光杆菌属(肠杆菌科)与昆虫病原线虫异小杆线虫形成单特异性共生关系。该系统为动物 - 微生物共生研究提供了一个易于处理的遗传模型。在这里,我们使用蛋白质组学方法研究了可能负责控制线虫与其共生细菌之间宿主特异性的细菌因子。使用二维凝胶电泳比较了发光杆菌亚种劳蒙迪亚种(宿主线虫 - 嗜菌异小杆线虫)和发光杆菌亚种阿克赫斯特亚种(宿主线虫 - 印度异小杆线虫)的总蛋白质谱,随后通过基质辅助激光解吸电离飞行时间质谱鉴定差异表达的蛋白质。鉴定出了39个独特的蛋白质斑点 - 24个来自发光杆菌亚种劳蒙迪亚种,15个来自发光杆菌亚种阿克赫斯特亚种。这些蛋白质包括可能直接参与确定宿主特异性的蛋白质(例如菌毛蛋白FimA、外膜蛋白A),通过影响细菌次级代谢间接参与的蛋白质(例如苹果酸脱氢酶Mdh、丙酮酸甲酸裂解酶PflA、黄素蛋白WrbA),或以未知方式参与的蛋白质(例如假设蛋白质、转录调节因子)。需要进一步的功能验证来确定这些细菌蛋白质在线虫 - 宿主特异性中的作用。