从裸（N型）赫氏颗石藻CCMP1516的多菌种培养物中分离出的四株细菌菌株的基因组序列草图
Draft Genome Sequences of Four Bacterial Strains Isolated from a Polymicrobial Culture of Naked (N-Type) Emiliania huxleyi CCMP1516.
作者信息
Orata Fabini D, Rosana Albert Remus R, Xu Yue, Simkus Danielle N, Bramucci Anna R, Boucher Yan, Case Rebecca J
机构信息
Department of Biological Sciences, University of Alberta, Edmonton, Alberta, Canada.
Department of Biological Sciences, University of Alberta, Edmonton, Alberta, Canada
出版信息
Genome Announc. 2016 Jul 14;4(4):e00674-16. doi: 10.1128/genomeA.00674-16.
Abstract
Strains of Sulfitobacter spp., Erythrobacter sp., and Marinobacter sp. were isolated from a polymicrobial culture of the naked (N-type) haptophyte Emiliania huxleyi strain CCMP1516. The genomes encode genes for the production of phytohormones, vitamins, and the consumption of their hosts' metabolic by-products, suggesting symbiotic interactions within this polymicrobial culture.
摘要
从裸型（N型）定鞭藻赫氏颗石藻CCMP1516的多菌种培养物中分离出了硫杆菌属、赤杆菌属和海杆菌属的菌株。这些基因组编码了用于生产植物激素、维生素以及消耗宿主代谢副产物的基因，这表明在这种多菌种培养物中存在共生相互作用。
相似文献
1
Draft Genome Sequences of Four Bacterial Strains Isolated from a Polymicrobial Culture of Naked (N-Type) Emiliania huxleyi CCMP1516.从裸（N型）赫氏颗石藻CCMP1516的多菌种培养物中分离出的四株细菌菌株的基因组序列草图
Genome Announc. 2016 Jul 14;4(4):e00674-16. doi: 10.1128/genomeA.00674-16.
2
Draft Genome Sequences of Seven Bacterial Strains Isolated from a Polymicrobial Culture of Coccolith-Bearing (C-Type) Emiliania huxleyi M217.
Genome Announc. 2016 Jul 14;4(4):e00673-16. doi: 10.1128/genomeA.00673-16.
3
Genome variations associated with viral susceptibility and calcification in Emiliania huxleyi.与赫氏颗石藻病毒易感性和钙化相关的基因组变异。
PLoS One. 2013 Nov 19;8(11):e80684. doi: 10.1371/journal.pone.0080684. eCollection 2013.
4
Draft Genome Sequence of Sulfitobacter sp. CB2047, a Member of the Roseobacter Clade of Marine Bacteria, Isolated from an Emiliania huxleyi Bloom.从赫氏颗石藻水华中分离出的海洋细菌玫瑰杆菌属菌株CB2047的基因组序列草图
Genome Announc. 2014 Nov 6;2(6):e01125-14. doi: 10.1128/genomeA.01125-14.
5
Complete Genome Sequence of sp. Strain D7, a Virulent Bacterium Isolated from an Algal Bloom in the North Atlantic.从北大西洋藻华中分离出的有毒细菌——[细菌名称]菌株D7的全基因组序列
Microbiol Resour Announc. 2018 Nov 15;7(19). doi: 10.1128/MRA.01379-18. eCollection 2018 Nov.
6
Phylogenomic analysis of Emiliania huxleyi provides evidence for haptophyte-stramenopile association and a chimeric haptophyte nuclear genome.对赫氏颗石藻的系统基因组分析为定鞭藻-不等鞭毛藻的关联以及嵌合的定鞭藻核基因组提供了证据。
Mar Genomics. 2015 Jun;21:31-42. doi: 10.1016/j.margen.2015.02.008. Epub 2015 Mar 5.
7
Indole-3-Acetic Acid Is Produced by Emiliania huxleyi Coccolith-Bearing Cells and Triggers a Physiological Response in Bald Cells.吲哚-3-乙酸由赫氏颗石藻的含颗石细胞产生，并在裸细胞中引发生理反应。
Front Microbiol. 2016 Jun 8;7:828. doi: 10.3389/fmicb.2016.00828. eCollection 2016.
8
The complete plastid genome sequence of the haptophyte Emiliania huxleyi: a comparison to other plastid genomes.定鞭藻赫氏艾氏藻的完整质体基因组序列：与其他质体基因组的比较
DNA Res. 2005;12(2):151-6. doi: 10.1093/dnares/12.2.151.
9
Abundant Sulfitobacter marine bacteria protect Emiliania huxleyi algae from pathogenic bacteria.大量的海洋硫杆菌可保护赫氏颗石藻免受病原菌侵害。
ISME Commun. 2023 Sep 22;3(1):100. doi: 10.1038/s43705-023-00311-y.
10
Complete Genome Sequence of sp. Strain G2, Isolated from a Lab Culture of the Calcifying Alga Emiliania huxleyi.从钙化藻类赫氏颗石藻实验室培养物中分离出的G2菌株的全基因组序列
Microbiol Resour Announc. 2023 Jan 24;12(1):e0106722. doi: 10.1128/mra.01067-22. Epub 2022 Nov 30.
引用本文的文献
1
Bacterial lifestyle switch in response to algal metabolites.细菌对藻类代谢物的生活方式转换。
Elife. 2023 Jan 24;12:e84400. doi: 10.7554/eLife.84400.
2
Loss of Motility as a Non-Lethal Mechanism for Intercolony Inhibition ("Sibling Rivalry") in .作为菌落间抑制（“同胞竞争”）的一种非致命机制的运动能力丧失 于……中
Microorganisms. 2021 Jan 5;9(1):103. doi: 10.3390/microorganisms9010103.
本文引用的文献
1
Indole-3-Acetic Acid Is Produced by Emiliania huxleyi Coccolith-Bearing Cells and Triggers a Physiological Response in Bald Cells.吲哚-3-乙酸由赫氏颗石藻的含颗石细胞产生，并在裸细胞中引发生理反应。
Front Microbiol. 2016 Jun 8;7:828. doi: 10.3389/fmicb.2016.00828. eCollection 2016.
2
Characterization of the Small RNA Transcriptome of the Marine Coccolithophorid, Emiliania huxleyi.海洋颗石藻（赫氏颗石藻）小RNA转录组的特征分析
PLoS One. 2016 Apr 21;11(4):e0154279. doi: 10.1371/journal.pone.0154279. eCollection 2016.
3
Interaction and signalling between a cosmopolitan phytoplankton and associated bacteria.广域浮游植物与相关细菌之间的相互作用和信号传递。
Nature. 2015 Jun 4;522(7554):98-101. doi: 10.1038/nature14488. Epub 2015 May 27.
4
Ancient origin of the biosynthesis of lignin precursors.木质素前体生物合成的古老起源。
Biol Direct. 2015 May 21;10:23. doi: 10.1186/s13062-015-0052-y.
5
MyTaxa: an advanced taxonomic classifier for genomic and metagenomic sequences.MyTaxa：一种用于基因组和宏基因组序列的高级分类学分类器。
Nucleic Acids Res. 2014 Apr;42(8):e73. doi: 10.1093/nar/gku169. Epub 2014 Mar 3.
6
The nature of laboratory domestication changes in freshly isolated Escherichia coli strains.新分离的大肠杆菌菌株的实验室驯化性质发生变化。
Environ Microbiol. 2014 Mar;16(3):813-28. doi: 10.1111/1462-2920.12208. Epub 2013 Jul 29.
7
The Jekyll-and-Hyde chemistry of Phaeobacter gallaeciensis.噬盐菌的善恶双重人格化学。
Nat Chem. 2011 Apr;3(4):331-5. doi: 10.1038/nchem.1002. Epub 2011 Feb 27.
8
Shifting the genomic gold standard for the prokaryotic species definition.动摇原核生物种定义的基因组黄金标准。
Proc Natl Acad Sci U S A. 2009 Nov 10;106(45):19126-31. doi: 10.1073/pnas.0906412106. Epub 2009 Oct 23.
9
The RAST Server: rapid annotations using subsystems technology.RAST服务器：使用子系统技术进行快速注释。
BMC Genomics. 2008 Feb 8;9:75. doi: 10.1186/1471-2164-9-75.
10
Algae acquire vitamin B12 through a symbiotic relationship with bacteria.藻类通过与细菌的共生关系获取维生素B12。
Nature. 2005 Nov 3;438(7064):90-3. doi: 10.1038/nature04056.
Zotero 插件