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从赫氏颗石藻水华中分离出的海洋细菌玫瑰杆菌属菌株CB2047的基因组序列草图

Draft Genome Sequence of Sulfitobacter sp. CB2047, a Member of the Roseobacter Clade of Marine Bacteria, Isolated from an Emiliania huxleyi Bloom.

作者信息

Ankrah Nana Y D, Lane Thomas, Budinoff Charles R, Hadden Mary K, Buchan Alison

机构信息

Department of Microbiology, University of Tennessee, Knoxville, Tennessee, USA.

出版信息

Genome Announc. 2014 Nov 6;2(6):e01125-14. doi: 10.1128/genomeA.01125-14.

DOI:10.1128/genomeA.01125-14
PMID:25377705
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4223456/
Abstract

We announce the draft genome sequence of Sulfitobacter sp. strain CB2047, a marine bacterium of the Roseobacter clade, isolated from a phytoplankton bloom. The genome encodes pathways for the catabolism of aromatic compounds as well as transformations of carbon monoxide and sulfur species. The strain also encodes a prophage as well as the gene transfer agent (GTA), both of which are prevalent among members of the Rhodobacterales order.

摘要

我们公布了硫杆菌属菌株CB2047的基因组序列草图,该菌株是从一次浮游植物大量繁殖中分离出的玫瑰杆菌纲海洋细菌。该基因组编码了芳香族化合物的分解代谢途径以及一氧化碳和硫物种的转化途径。该菌株还编码一种前噬菌体以及基因转移因子(GTA),这两者在红杆菌目成员中普遍存在。

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Draft Genome Sequence of Sulfitobacter sp. CB2047, a Member of the Roseobacter Clade of Marine Bacteria, Isolated from an Emiliania huxleyi Bloom.从赫氏颗石藻水华中分离出的海洋细菌玫瑰杆菌属菌株CB2047的基因组序列草图
Genome Announc. 2014 Nov 6;2(6):e01125-14. doi: 10.1128/genomeA.01125-14.
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本文引用的文献

1
Master recyclers: features and functions of bacteria associated with phytoplankton blooms.大师级回收者:与浮游植物水华相关的细菌的特征和功能。
Nat Rev Microbiol. 2014 Oct;12(10):686-98. doi: 10.1038/nrmicro3326. Epub 2014 Aug 19.
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Genome Sequences of Two Temperate Phages, ΦCB2047-A and ΦCB2047-C, Infecting Sulfitobacter sp. Strain 2047.两种感染硫杆菌属菌株2047的温和噬菌体ΦCB2047 - A和ΦCB2047 - C的基因组序列
Genome Announc. 2014 Jun 5;2(3):e00108-14. doi: 10.1128/genomeA.00108-14.
3
Phage infection of an environmentally relevant marine bacterium alters host metabolism and lysate composition.噬菌体感染一种具有环境相关性的海洋细菌会改变宿主的新陈代谢和裂解液的组成。
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Acyl-homoserine lactone-based quorum sensing in the Roseobacter clade: complex cell-to-cell communication controls multiple physiologies.基于酰基高丝氨酸内酯的群体感应在玫瑰杆菌群中:复杂的细胞间通讯控制多种生理机能。
Front Microbiol. 2013 Nov 12;4:336. doi: 10.3389/fmicb.2013.00336. eCollection 2013.
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Gene transfer agent (GTA) genes reveal diverse and dynamic Roseobacter and Rhodobacter populations in the Chesapeake Bay.基因转移因子(GTA)基因揭示了切萨皮克湾中多样且动态变化的玫瑰杆菌属和红杆菌属菌群。
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KAAS: an automatic genome annotation and pathway reconstruction server.KAAS:一个自动基因组注释和通路重建服务器。
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Distribution, diversity and ecology of aerobic CO-oxidizing bacteria.好氧一氧化碳氧化细菌的分布、多样性与生态学
Nat Rev Microbiol. 2007 Feb;5(2):107-18. doi: 10.1038/nrmicro1595.
8
Oxidation of reduced inorganic sulfur compounds by bacteria: emergence of a common mechanism?细菌对还原态无机硫化合物的氧化作用:一种共同机制的出现?
Appl Environ Microbiol. 2001 Jul;67(7):2873-82. doi: 10.1128/AEM.67.7.2873-2882.2001.