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嗜土黄杆菌新种,从土壤中分离得到。

Flavobacterium terriphilum sp. nov., isolated from soil.

作者信息

Zhang Guojing, Xian Wendong, Chu Qiaoling, Yang Jian, Liu Wen, Yang Lingling, Xiao Min, Jiang Hongchen, Li Wenjun

机构信息

State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Wuhan 430074, PR China.

Yunnan Institute of Microbiology, Yunnan University, Kunming 650091, PR China.

出版信息

Int J Syst Evol Microbiol. 2016 Oct;66(10):4276-4281. doi: 10.1099/ijsem.0.001347. Epub 2016 Jul 27.

Abstract

A novel aerobic, yellow-pigmented, Gram-stain-negative, rod-shaped bacterial strain, CUG00004T, was isolated from a soil sample. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain CUG00004T was a member of the genus Flavobacterium and showed high sequence similarity with Flavobacterium soli DSM 19725T (96.9 %) and Flavobacterium glaciei CGMCC 0499T (95.6 %). The level of DNA-DNA relatedness between strain CUG00004T and F. soli DSM 19725T and F. glaciei CGMCC 1.5380T was 42.5 and 43.4 %, respectively. Strain CUG00004T was moderately alkaliphilic and grew optimally at pH 8.0, at 28 °C and in the presence of 0-1 % (w/v) NaCl. This organism contained menaquinone-6 (MK-6) as the only isoprenoid quinone and iso-C15 : 0, iso-C17 : 0 3-OH, anteiso-C15 : 0 and summed feature 9 (comprising iso-C17 : 1ω9c and/or C16 : 0 10-methyl) as the major fatty acids. The DNA G+C content of strain CUG00004T was 36.3 mol%. On the basis of phylogenetic, physiological and chemotaxonomic analyses, strain CUG00004T represents a novel species, for which the name Flavobacterium terriphilum sp. nov. is proposed. The type strain is CUG00004T (=CCTCC AB 2014151T=KCTC 42876T).

摘要

从一份土壤样品中分离出一株新型需氧、产黄色色素、革兰氏染色阴性、杆状的细菌菌株CUG00004T。基于16S rRNA基因序列的系统发育分析表明,菌株CUG00004T是黄杆菌属的成员,与土壤黄杆菌DSM 19725T(96.9%)和冰川黄杆菌CGMCC 0499T(95.6%)显示出高序列相似性。菌株CUG00004T与土壤黄杆菌DSM 19725T以及冰川黄杆菌CGMCC 1.5380T之间的DNA-DNA相关性水平分别为42.5%和43.4%。菌株CUG00004T为中度嗜碱菌,在pH 8.0、28℃以及0-1%(w/v)NaCl存在的条件下生长最佳。该菌株含有甲基萘醌-6(MK-6)作为唯一的类异戊二烯醌,以及异C15 : 0、异C17 : 0 3-OH、anteiso-C15 : 0和总和特征9(包括异C17 : 1ω9c和/或C16 : 0 10-甲基)作为主要脂肪酸。菌株CUG00004T的DNA G+C含量为36.3 mol%。基于系统发育、生理和化学分类分析,菌株CUG00004T代表一个新物种,为此提出新名为嗜土黄杆菌(Flavobacterium terriphilum sp. nov.)。模式菌株为CUG00004T(=CCTCC AB 2014151T=KCTC 42876T)。

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