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从丛枝菌根真菌孢子壁分离出的细菌的遗传多样性及关联特征

Genetic Diversity and Association Characters of Bacteria Isolated from Arbuscular Mycorrhizal Fungal Spore Walls.

作者信息

Selvakumar Gopal, Krishnamoorthy Ramasamy, Kim Kiyoon, Sa Tong-Min

机构信息

Department of Environmental and Biological Chemistry, Chungbuk National University, Cheongju, Chungbuk, Republic of Korea.

出版信息

PLoS One. 2016 Aug 1;11(8):e0160356. doi: 10.1371/journal.pone.0160356. eCollection 2016.

Abstract

Association between arbuscular mycorrhizal fungi (AMF) and bacteria has long been studied. However, the factors influencing their association in the natural environment is still unknown. This study aimed to isolate bacteria associated with spore walls of AMF and identify their potential characters for association. Spores collected from coastal reclamation land were differentiated based on their morphology and identified by 18S rDNA sequencing as Funneliformis caledonium, Racocetra alborosea and Funneliformis mosseae. Bacteria associated with AMF spore walls were isolated after treating them with disinfection solution at different time intervals. After 0, 10 and 20 min of spore disinfection, 86, 24 and 10 spore associated bacteria (SAB) were isolated, respectively. BOX-PCR fingerprinting analysis showed that diverse bacterial communities were associated to AMF spores. Bacteria belonging to the same genera could associate with different AMF spores. Gram positive bacteria were more closely associated with AMF spores. Isolated SAB were characterized and tested for spore association characters such as chitinase, protease, cellulase enzymes and exopolysaccharide production (EPS). Among the 120 SAB, 113 SAB were able to show one or more characters for association and seven SAB did not show any association characters. The 16S rDNA sequence of SAB revealed that bacteria belonging to the phyla Firmicutes, Proteobacteria, Actinobacteria and Bactereiodes were associated with AMF spore walls.

摘要

丛枝菌根真菌(AMF)与细菌之间的关联长期以来一直受到研究。然而,在自然环境中影响它们关联的因素仍然未知。本研究旨在分离与AMF孢子壁相关的细菌,并确定它们潜在的关联特性。从沿海开垦地收集的孢子根据其形态进行区分,并通过18S rDNA测序鉴定为喀里多尼亚漏斗孢囊霉、白玫瑰状根孢囊霉和摩西斗管囊霉。用消毒溶液在不同时间间隔处理后,分离出与AMF孢子壁相关的细菌。在孢子消毒0、10和20分钟后,分别分离出86、24和10个孢子相关细菌(SAB)。BOX-PCR指纹分析表明,不同的细菌群落与AMF孢子相关。属于同一属的细菌可以与不同的AMF孢子相关联。革兰氏阳性细菌与AMF孢子的关联更为密切。对分离出的SAB进行了特性鉴定,并测试了它们的孢子关联特性,如几丁质酶、蛋白酶、纤维素酶和胞外多糖产生(EPS)。在120个SAB中,113个SAB能够表现出一种或多种关联特性,7个SAB没有表现出任何关联特性。SAB的16S rDNA序列显示,属于厚壁菌门、变形菌门、放线菌门和拟杆菌门的细菌与AMF孢子壁相关。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/71b1/4968797/835a3728335e/pone.0160356.g001.jpg

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