Velanis Christos N, Herzyk Pawel, Jenkins Gareth I
Institute of Molecular, Cell and Systems Biology, College of Medical, Veterinary and Life Sciences, University of Glasgow, Bower Building, Glasgow, G12 8QQ, UK.
Glasgow Polyomics, Wolfson Wohl Cancer Research Centre, University of Glasgow, Garscube Estate, Switchback Road, Bearsden, G61 1QH, UK.
Plant Mol Biol. 2016 Nov;92(4-5):425-443. doi: 10.1007/s11103-016-0522-3. Epub 2016 Aug 17.
The photoreceptor UV RESISTANCE LOCUS 8 (UVR8) specifically mediates photomorphogenic responses to UV-B wavelengths. UVR8 acts by regulating transcription of a set of genes, but the underlying mechanisms are unknown. Previous research indicated that UVR8 can associate with chromatin, but the specificity and functional significance of this interaction are not clear. Here we show, by chromatin immunoprecipitation, that UV-B exposure of Arabidopsis increases acetylation of lysines K9 and/or K14 of histone H3 at UVR8-regulated gene loci in a UVR8-dependent manner. The transcription factors HY5 and/or HYH, which mediate UVR8-regulated transcription, are also required for this chromatin modification, at least for the ELIP1 gene. Furthermore, sequencing of the immunoprecipitated DNA revealed that all UV-B-induced enrichments in H3K9,14diacetylation across the genome are UVR8-dependent, and approximately 40 % of the enriched loci contain known UVR8-regulated genes. In addition, inhibition of histone acetylation by anacardic acid reduces the UV-B induced, UVR8 mediated expression of ELIP1 and CHS. No evidence was obtained in yeast 2-hybrid assays for a direct interaction between either UVR8 or HY5 and several proteins involved in light-regulated histone modification, nor for the involvement of these proteins in UVR8-mediated responses in plants, although functional redundancy between proteins could influence the results. In summary, this study shows that UVR8 regulates a specific chromatin modification associated with transcriptional regulation of a set of UVR8-target genes.
光感受器紫外线抗性位点8(UVR8)特异性介导对UV-B波长的光形态建成反应。UVR8通过调节一组基因的转录发挥作用,但其潜在机制尚不清楚。先前的研究表明UVR8可与染色质结合,但其相互作用的特异性和功能意义尚不清楚。在此,我们通过染色质免疫沉淀表明,拟南芥的UV-B照射以UVR8依赖的方式增加了UVR8调控基因位点处组蛋白H3赖氨酸K9和/或K14的乙酰化。介导UVR8调控转录的转录因子HY5和/或HYH至少对于ELIP1基因也是这种染色质修饰所必需的。此外,对免疫沉淀DNA的测序显示,全基因组中所有UV-B诱导的H3K9、14二乙酰化富集均依赖于UVR8,且约40%的富集位点含有已知的UVR8调控基因。此外,漆树酸对组蛋白乙酰化的抑制作用降低了UV-B诱导的、UVR8介导的ELIP1和CHS的表达。在酵母双杂交试验中未获得UVR8或HY5与几种参与光调控组蛋白修饰的蛋白质之间直接相互作用的证据,也未获得这些蛋白质参与植物中UVR8介导反应的证据,尽管蛋白质之间的功能冗余可能会影响结果。总之,本研究表明UVR8调节与一组UVR8靶基因转录调控相关的特定染色质修饰。